Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC7.62□□□□□ -1.19
RPAP1Q9BWH6 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC7.62□□□□□ -1.19
RPAP1Q9BWH6 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC7.62□□□□□ -1.19
RPAP1Q9BWH6 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.62□□□□□ -1.19
RPAP1Q9BWH6 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC7.62□□□□□ -1.19
RPAP1Q9BWH6 AL008723.3-201ENST00000608926 449 ntBASIC7.62□□□□□ -1.19
RPAP1Q9BWH6 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC7.62□□□□□ -1.19
RPAP1Q9BWH6 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
RPAP1Q9BWH6 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.62□□□□□ -1.19
RPAP1Q9BWH6 SNX18P12-201ENST00000624821 759 ntBASIC7.62□□□□□ -1.19
RPAP1Q9BWH6 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RPAP1Q9BWH6 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.62□□□□□ -1.19
RPAP1Q9BWH6 AC068769.1-201ENST00000474767 2426 ntBASIC7.62□□□□□ -1.19
RPAP1Q9BWH6 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RPAP1Q9BWH6 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
RPAP1Q9BWH6 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RPAP1Q9BWH6 AC011369.2-201ENST00000624423 1567 ntBASIC7.62□□□□□ -1.19
RPAP1Q9BWH6 AC110716.2-201ENST00000563865 3945 ntBASIC7.62□□□□□ -1.19
RPAP1Q9BWH6 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
RPAP1Q9BWH6 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
RPAP1Q9BWH6 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC7.62□□□□□ -1.19
RPAP1Q9BWH6 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 AC005225.5-201ENST00000623547 2225 ntBASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 IGLV3-4-201ENST00000432300 244 ntBASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 PPIAP20-201ENST00000449839 135 ntBASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 MTND6P8-201ENST00000503471 522 ntBASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 AC004801.6-201ENST00000616571 978 ntBASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 OR7E91P-202ENST00000642062 1198 ntBASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 HSPD1P9-201ENST00000420325 1636 ntBASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
RPAP1Q9BWH6 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 RNA5SP346-201ENST00000363541 121 ntBASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 AC095052.1-201ENST00000509955 863 ntBASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 MRPS21P8-201ENST00000569196 235 ntBASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 AC012146.2-201ENST00000576545 416 ntBASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 MIR3189-201ENST00000578735 73 ntBASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 AC024589.2-201ENST00000605642 1294 ntBASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 MIR6729-201ENST00000618194 65 ntBASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 FO681491.1-202ENST00000623392 737 ntBASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 AC073365.1-203ENST00000641055 1992 ntBASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 SLC9B1P1-201ENST00000331172 1337 ntBASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 AC027575.3-201ENST00000583058 2747 ntBASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 LYARP1-201ENST00000436977 1501 ntBASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RPAP1Q9BWH6 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms