Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
TRAIPQ9BWF2 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 COL6A4P1-202ENST00000487147 4317 ntBASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 IGKV7-3-201ENST00000357453 298 ntBASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 SNORA73B-201ENST00000363217 204 ntBASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 ERHP2-201ENST00000402323 299 ntBASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 ZNF37CP-201ENST00000406795 241 ntBASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 C2orf76-203ENST00000409523 747 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 FTOP1-201ENST00000419363 861 ntBASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 TXNL1P1-201ENST00000429528 554 ntBASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 ANKRD26P4-201ENST00000455755 950 ntBASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 LINC01053-201ENST00000457628 771 ntTSL 2 BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 RPS3AP22-201ENST00000488297 769 ntBASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 AC008040.4-201ENST00000494834 768 ntBASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 AC117522.2-201ENST00000510049 657 ntBASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 IGKV1D-32-201ENST00000517449 318 ntBASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 AL021368.3-201ENST00000607119 578 ntBASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 AC012510.1-201ENST00000607946 759 ntBASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 AC005277.2-201ENST00000617898 390 ntBASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 AL121985.2-201ENST00000621192 555 ntBASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 SNORA43.5-201ENST00000631270 138 ntBASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 OR8B1P-202ENST00000641132 1178 ntBASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 MAK-202ENST00000354489 3941 ntTSL 5 BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC8.18□□□□□ -1.1
TRAIPQ9BWF2 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 USP3-201ENST00000268049 5311 ntTSL 5 BASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 BX005019.1-201ENST00000561881 1810 ntBASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 ARHGAP42P1-201ENST00000507474 1976 ntBASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 AC093311.1-201ENST00000506586 2021 ntBASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 MIR27A-201ENST00000385073 78 ntBASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 IL6-203ENST00000401651 539 ntTSL 2 BASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 TYMSP1-201ENST00000407851 869 ntBASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 AL390840.1-201ENST00000420303 988 ntBASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 AC009263.1-201ENST00000441193 1239 ntBASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 SS18L2P1-201ENST00000445923 213 ntBASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 AL606490.1-201ENST00000452266 765 ntBASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 DNAJC19P8-201ENST00000452887 259 ntBASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 RN7SL332P-201ENST00000482163 254 ntBASIC8.17□□□□□ -1.1
TRAIPQ9BWF2 RN7SL152P-201ENST00000484176 298 ntBASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms