Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC116917.1-201ENST00000520558 305 ntBASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 OR56A7P-201ENST00000524865 941 ntBASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 OR4V1P-201ENST00000525394 1140 ntBASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 AC027455.1-201ENST00000574104 594 ntBASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 AC012213.3-201ENST00000577199 777 ntBASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 AL353600.1-201ENST00000608148 251 ntBASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 MIR1264-201ENST00000616374 69 ntBASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SYNGAP1Q96PV0 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
SYNGAP1Q96PV0 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.96□□□□□ -1.13
SYNGAP1Q96PV0 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.96□□□□□ -1.13
SYNGAP1Q96PV0 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.96□□□□□ -1.13
SYNGAP1Q96PV0 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
SYNGAP1Q96PV0 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.96□□□□□ -1.13
SYNGAP1Q96PV0 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
SYNGAP1Q96PV0 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.96□□□□□ -1.13
SYNGAP1Q96PV0 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
SYNGAP1Q96PV0 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 Y_RNA.619-201ENST00000410951 90 ntBASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 TRIM60P17-201ENST00000415181 719 ntBASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 BX664727.1-201ENST00000416024 466 ntBASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 MTCYBP29-201ENST00000436327 1006 ntBASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 FABP5P3-201ENST00000437960 408 ntBASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 TIMM8BP2-201ENST00000445940 251 ntBASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 OR51P1P-201ENST00000447547 942 ntBASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 AC122718.2-201ENST00000505325 591 ntBASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 IGLVV-66-201ENST00000523818 341 ntBASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 AP001000.1-201ENST00000526843 742 ntBASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 OR7E128P-201ENST00000532736 1024 ntBASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 AP005136.1-201ENST00000579765 429 ntBASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 AC009955.2-201ENST00000597288 542 ntBASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 MIR6823-201ENST00000622118 61 ntBASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 MIR6503-201ENST00000622884 86 ntBASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SYNGAP1Q96PV0 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 ATP5BP1-201ENST00000411980 1574 ntBASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 CASC19-238ENST00000641523 1558 ntBASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 BX322650.1-201ENST00000332359 2143 ntBASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 CDY19P-201ENST00000411668 1613 ntBASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 KARSP2-201ENST00000415696 1639 ntBASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 CDY18P-201ENST00000438294 1609 ntBASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms