Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LINC00346Q8IVM7 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
LINC00346Q8IVM7 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LINC00346Q8IVM7 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.76□□□□□ -1.49
LINC00346Q8IVM7 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.76□□□□□ -1.49
LINC00346Q8IVM7 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LINC00346Q8IVM7 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
LINC00346Q8IVM7 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LINC00346Q8IVM7 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LINC00346Q8IVM7 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.76□□□□□ -1.49
LINC00346Q8IVM7 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.76□□□□□ -1.49
LINC00346Q8IVM7 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 AC079753.1-201ENST00000623243 3868 ntBASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 STAG3L4-201ENST00000352103 530 ntBASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 RN7SKP191-201ENST00000364713 306 ntBASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 RNA5SP442-201ENST00000365050 107 ntBASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 RNU6-729P-201ENST00000384399 107 ntBASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 RNA5SP105-201ENST00000391123 113 ntBASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 AL050335.1-201ENST00000396909 869 ntBASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 AL672212.1-201ENST00000422246 400 ntBASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 AC106901.1-201ENST00000425086 698 ntBASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 AL121578.2-201ENST00000448797 447 ntBASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 RN7SL70P-201ENST00000478322 302 ntBASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 AC022206.1-201ENST00000495947 347 ntBASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 AC073648.3-201ENST00000504939 925 ntBASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 AC134698.1-201ENST00000511619 643 ntBASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 AC130366.1-201ENST00000526505 1192 ntBASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 AP002004.1-206ENST00000532441 876 ntBASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 MTND2P13-201ENST00000577438 1039 ntBASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 AC093635.1-201ENST00000609028 555 ntBASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 AL137000.1-201ENST00000610528 1244 ntBASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 AL354696.1-201ENST00000614652 497 ntBASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 AP001885.1-201ENST00000621658 558 ntBASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 AC015722.2-201ENST00000622210 551 ntBASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 AC009120.7-201ENST00000623452 780 ntBASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
LINC00346Q8IVM7 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.74□□□□□ -1.49
LINC00346Q8IVM7 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.74□□□□□ -1.49
LINC00346Q8IVM7 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
LINC00346Q8IVM7 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LINC00346Q8IVM7 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LINC00346Q8IVM7 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LINC00346Q8IVM7 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
LINC00346Q8IVM7 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LINC00346Q8IVM7 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LINC00346Q8IVM7 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LINC00346Q8IVM7 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LINC00346Q8IVM7 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.74□□□□□ -1.49
LINC00346Q8IVM7 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LINC00346Q8IVM7 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
LINC00346Q8IVM7 RNU6-152P-201ENST00000384037 107 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms