Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC71Q8IV32 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC71Q8IV32 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC71Q8IV32 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC71Q8IV32 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC71Q8IV32 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC71Q8IV32 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC71Q8IV32 AC005725.1-201ENST00000577346 2607 ntBASIC5.97□□□□□ -1.45
CCDC71Q8IV32 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC71Q8IV32 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC71Q8IV32 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC71Q8IV32 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.97□□□□□ -1.45
CCDC71Q8IV32 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC71Q8IV32 RNA5SP485-201ENST00000365053 119 ntBASIC5.97□□□□□ -1.45
CCDC71Q8IV32 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CCDC71Q8IV32 AL391419.1-201ENST00000398901 1275 ntBASIC5.97□□□□□ -1.45
CCDC71Q8IV32 PSMA6P1-201ENST00000400275 741 ntBASIC5.97□□□□□ -1.45
CCDC71Q8IV32 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC71Q8IV32 RPS17P17-201ENST00000419392 409 ntBASIC5.97□□□□□ -1.45
CCDC71Q8IV32 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC71Q8IV32 NPM1P25-201ENST00000429734 854 ntBASIC5.97□□□□□ -1.45
CCDC71Q8IV32 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC71Q8IV32 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC71Q8IV32 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC71Q8IV32 COL11A2P1-205ENST00000441798 676 ntBASIC5.97□□□□□ -1.45
CCDC71Q8IV32 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC71Q8IV32 AC093166.3-201ENST00000448785 303 ntBASIC5.97□□□□□ -1.45
CCDC71Q8IV32 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC71Q8IV32 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC71Q8IV32 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC71Q8IV32 AC117500.1-201ENST00000497352 755 ntBASIC5.97□□□□□ -1.45
CCDC71Q8IV32 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
CCDC71Q8IV32 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.97□□□□□ -1.45
CCDC71Q8IV32 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC71Q8IV32 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC71Q8IV32 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC71Q8IV32 OR1E3-201ENST00000575608 948 ntBASIC5.97□□□□□ -1.45
CCDC71Q8IV32 AC091133.5-201ENST00000603088 301 ntBASIC5.97□□□□□ -1.45
CCDC71Q8IV32 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC71Q8IV32 AC016252.1-201ENST00000609721 474 ntBASIC5.97□□□□□ -1.45
CCDC71Q8IV32 AC024255.1-201ENST00000614376 102 ntBASIC5.97□□□□□ -1.45
CCDC71Q8IV32 MIR6721-201ENST00000617181 87 ntBASIC5.97□□□□□ -1.45
CCDC71Q8IV32 AC114546.4-201ENST00000624413 369 ntBASIC5.97□□□□□ -1.45
CCDC71Q8IV32 AC111152.1-202ENST00000635848 339 ntBASIC5.97□□□□□ -1.45
CCDC71Q8IV32 CASC19-274ENST00000642018 970 ntBASIC5.97□□□□□ -1.45
CCDC71Q8IV32 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC71Q8IV32 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC71Q8IV32 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC71Q8IV32 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC71Q8IV32 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
CCDC71Q8IV32 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC71Q8IV32 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC71Q8IV32 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC71Q8IV32 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC71Q8IV32 AC092070.2-203ENST00000598377 3644 ntBASIC5.97□□□□□ -1.45
CCDC71Q8IV32 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
CCDC71Q8IV32 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
CCDC71Q8IV32 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.96□□□□□ -1.45
CCDC71Q8IV32 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
CCDC71Q8IV32 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
CCDC71Q8IV32 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC71Q8IV32 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC71Q8IV32 PPIAP24-201ENST00000328558 471 ntBASIC5.96□□□□□ -1.46
CCDC71Q8IV32 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC71Q8IV32 OR7E156P-201ENST00000400303 464 ntBASIC5.96□□□□□ -1.46
CCDC71Q8IV32 PRELID1P1-201ENST00000403549 660 ntBASIC5.96□□□□□ -1.46
CCDC71Q8IV32 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.96□□□□□ -1.46
CCDC71Q8IV32 RANP6-201ENST00000413691 644 ntBASIC5.96□□□□□ -1.46
CCDC71Q8IV32 VN1R3-201ENST00000418822 919 ntBASIC5.96□□□□□ -1.46
CCDC71Q8IV32 RPS7P12-201ENST00000422385 582 ntBASIC5.96□□□□□ -1.46
CCDC71Q8IV32 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.96□□□□□ -1.46
CCDC71Q8IV32 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC71Q8IV32 RPL26P30-201ENST00000453533 435 ntBASIC5.96□□□□□ -1.46
CCDC71Q8IV32 PFN1P8-201ENST00000497012 543 ntBASIC5.96□□□□□ -1.46
CCDC71Q8IV32 AC093870.1-201ENST00000506837 213 ntBASIC5.96□□□□□ -1.46
CCDC71Q8IV32 HMGN1P16-201ENST00000508308 283 ntBASIC5.96□□□□□ -1.46
CCDC71Q8IV32 RN7SKP67-201ENST00000515905 235 ntBASIC5.96□□□□□ -1.46
CCDC71Q8IV32 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.96□□□□□ -1.46
CCDC71Q8IV32 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.96□□□□□ -1.46
CCDC71Q8IV32 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CCDC71Q8IV32 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.96□□□□□ -1.46
CCDC71Q8IV32 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.96□□□□□ -1.46
CCDC71Q8IV32 ANP32BP1-202ENST00000568553 737 ntBASIC5.96□□□□□ -1.46
CCDC71Q8IV32 RN7SL270P-201ENST00000579643 281 ntBASIC5.96□□□□□ -1.46
CCDC71Q8IV32 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.96□□□□□ -1.46
CCDC71Q8IV32 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC5.96□□□□□ -1.46
CCDC71Q8IV32 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC71Q8IV32 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.96□□□□□ -1.46
CCDC71Q8IV32 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC71Q8IV32 AL589765.6-201ENST00000601909 549 ntBASIC5.96□□□□□ -1.46
CCDC71Q8IV32 SNORD96A-201ENST00000606577 79 ntBASIC5.96□□□□□ -1.46
CCDC71Q8IV32 MIR6861-201ENST00000618657 64 ntBASIC5.96□□□□□ -1.46
CCDC71Q8IV32 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.96□□□□□ -1.46
CCDC71Q8IV32 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC71Q8IV32 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC71Q8IV32 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.96□□□□□ -1.46
CCDC71Q8IV32 AC105235.1-201ENST00000623208 1816 ntBASIC5.96□□□□□ -1.46
CCDC71Q8IV32 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.96□□□□□ -1.46
CCDC71Q8IV32 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
CCDC71Q8IV32 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms