Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 MARK2P12-201ENST00000420129 585 ntBASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 RPS7P14-201ENST00000426405 583 ntBASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 AC110749.1-201ENST00000462007 357 ntBASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 SCARNA18.1-201ENST00000516330 83 ntBASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 RNA5SP434-201ENST00000516647 121 ntBASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 IGKV1D-22-201ENST00000518953 324 ntBASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 IGHV3-57-201ENST00000520143 280 ntBASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 AC051619.2-201ENST00000559063 397 ntBASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 AC108673.3-201ENST00000609183 335 ntBASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 AC012653.2-201ENST00000621880 420 ntBASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 AC087821.1-201ENST00000623639 567 ntBASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 AC073488.3-201ENST00000631611 778 ntBASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 RNF19BPY-201ENST00000458209 1550 ntBASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 AC130360.2-201ENST00000533477 1556 ntBASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 NEK2P4-201ENST00000425793 1329 ntBASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 AL512310.3-201ENST00000547023 1335 ntBASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LYSMD4Q5XG99 AL133243.2-201ENST00000610331 1621 ntBASIC6.21□□□□□ -1.41
LYSMD4Q5XG99 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
LYSMD4Q5XG99 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.41
LYSMD4Q5XG99 AC062022.1-201ENST00000451026 1684 ntBASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 GAPDHP48-201ENST00000436626 961 ntBASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 AL355355.1-201ENST00000442900 793 ntBASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 DNAJC19P5-201ENST00000443295 316 ntBASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 HMGN1P36-201ENST00000446623 298 ntBASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 VPS25P1-201ENST00000455691 508 ntBASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 AC010343.2-201ENST00000510162 224 ntBASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 AC020978.7-201ENST00000575953 1187 ntBASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 AL513218.1-201ENST00000606527 391 ntBASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 AL512624.1-201ENST00000613638 469 ntBASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 AL049767.1-202ENST00000637826 242 ntBASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 AC015689.2-201ENST00000528172 1738 ntBASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.21□□□□□ -1.42
LYSMD4Q5XG99 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LYSMD4Q5XG99 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms