Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NKX6-1P78426 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NKX6-1P78426 SAMMSON-222ENST00000641901 2727 ntBASIC6.2□□□□□ -1.42
NKX6-1P78426 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC6.2□□□□□ -1.42
NKX6-1P78426 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NKX6-1P78426 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC6.2□□□□□ -1.42
NKX6-1P78426 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
NKX6-1P78426 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
NKX6-1P78426 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NKX6-1P78426 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.2□□□□□ -1.42
NKX6-1P78426 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC6.2□□□□□ -1.42
NKX6-1P78426 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.2□□□□□ -1.42
NKX6-1P78426 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NKX6-1P78426 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
NKX6-1P78426 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
NKX6-1P78426 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC6.2□□□□□ -1.42
NKX6-1P78426 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NKX6-1P78426 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
NKX6-1P78426 RNU5E-10P-201ENST00000363506 118 ntBASIC6.2□□□□□ -1.42
NKX6-1P78426 RN7SKP187-201ENST00000365536 330 ntBASIC6.2□□□□□ -1.42
NKX6-1P78426 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NKX6-1P78426 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
NKX6-1P78426 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
NKX6-1P78426 RNU6-316P-201ENST00000391027 107 ntBASIC6.2□□□□□ -1.42
NKX6-1P78426 RNU6-796P-201ENST00000391086 107 ntBASIC6.2□□□□□ -1.42
NKX6-1P78426 RPL22P22-201ENST00000395439 379 ntBASIC6.2□□□□□ -1.42
NKX6-1P78426 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC6.2□□□□□ -1.42
NKX6-1P78426 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC6.2□□□□□ -1.42
NKX6-1P78426 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.2□□□□□ -1.42
NKX6-1P78426 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC6.2□□□□□ -1.42
NKX6-1P78426 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.2□□□□□ -1.42
NKX6-1P78426 AC008173.1-201ENST00000418901 264 ntBASIC6.2□□□□□ -1.42
NKX6-1P78426 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.2□□□□□ -1.42
NKX6-1P78426 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.2□□□□□ -1.42
NKX6-1P78426 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC6.2□□□□□ -1.42
NKX6-1P78426 FABP5P3-201ENST00000437960 408 ntBASIC6.2□□□□□ -1.42
NKX6-1P78426 AC114755.4-201ENST00000439114 443 ntBASIC6.2□□□□□ -1.42
NKX6-1P78426 SNRPFP2-201ENST00000440710 251 ntBASIC6.2□□□□□ -1.42
NKX6-1P78426 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.2□□□□□ -1.42
NKX6-1P78426 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
NKX6-1P78426 PSPC1P2-201ENST00000455130 225 ntBASIC6.2□□□□□ -1.42
NKX6-1P78426 AGKP1-201ENST00000455254 1263 ntBASIC6.2□□□□□ -1.42
NKX6-1P78426 RPSAP7-201ENST00000456871 885 ntBASIC6.2□□□□□ -1.42
NKX6-1P78426 AC020898.1-201ENST00000474167 787 ntBASIC6.2□□□□□ -1.42
NKX6-1P78426 AC026254.2-201ENST00000475295 371 ntBASIC6.2□□□□□ -1.42
NKX6-1P78426 AC020779.1-201ENST00000478757 796 ntBASIC6.2□□□□□ -1.42
NKX6-1P78426 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC6.2□□□□□ -1.42
NKX6-1P78426 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC6.2□□□□□ -1.42
NKX6-1P78426 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.2□□□□□ -1.42
NKX6-1P78426 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC6.2□□□□□ -1.42
NKX6-1P78426 RFESD-208ENST00000513950 464 ntTSL 5 BASIC6.2□□□□□ -1.42
NKX6-1P78426 RNA5SP116-201ENST00000516132 98 ntBASIC6.2□□□□□ -1.42
NKX6-1P78426 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.2□□□□□ -1.42
NKX6-1P78426 HAUS1P3-201ENST00000523909 662 ntBASIC6.2□□□□□ -1.42
NKX6-1P78426 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.2□□□□□ -1.42
NKX6-1P78426 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.2□□□□□ -1.42
NKX6-1P78426 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
NKX6-1P78426 AL135978.1-201ENST00000553618 1266 ntBASIC6.2□□□□□ -1.42
NKX6-1P78426 AC107958.1-201ENST00000556576 290 ntBASIC6.2□□□□□ -1.42
NKX6-1P78426 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
NKX6-1P78426 AL031846.1-201ENST00000560933 314 ntBASIC6.2□□□□□ -1.42
NKX6-1P78426 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.2□□□□□ -1.42
NKX6-1P78426 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC6.2□□□□□ -1.42
NKX6-1P78426 AC068020.1-201ENST00000594215 661 ntBASIC6.2□□□□□ -1.42
NKX6-1P78426 AC036176.3-201ENST00000602456 418 ntBASIC6.2□□□□□ -1.42
NKX6-1P78426 AC130352.1-201ENST00000602979 661 ntBASIC6.2□□□□□ -1.42
NKX6-1P78426 AC023513.1-201ENST00000604396 691 ntBASIC6.2□□□□□ -1.42
NKX6-1P78426 AC245100.7-201ENST00000609678 442 ntBASIC6.2□□□□□ -1.42
NKX6-1P78426 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC6.2□□□□□ -1.42
NKX6-1P78426 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.2□□□□□ -1.42
NKX6-1P78426 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.2□□□□□ -1.42
NKX6-1P78426 CLUHP10-201ENST00000631979 980 ntBASIC6.2□□□□□ -1.42
NKX6-1P78426 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC6.2□□□□□ -1.42
NKX6-1P78426 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NKX6-1P78426 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.2□□□□□ -1.42
NKX6-1P78426 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
NKX6-1P78426 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.2□□□□□ -1.42
NKX6-1P78426 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC6.2□□□□□ -1.42
NKX6-1P78426 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC6.2□□□□□ -1.42
NKX6-1P78426 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
NKX6-1P78426 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NKX6-1P78426 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NKX6-1P78426 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.2□□□□□ -1.42
NKX6-1P78426 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
NKX6-1P78426 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
NKX6-1P78426 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
NKX6-1P78426 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.2□□□□□ -1.42
NKX6-1P78426 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.2□□□□□ -1.42
NKX6-1P78426 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NKX6-1P78426 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
NKX6-1P78426 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NKX6-1P78426 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.2□□□□□ -1.42
NKX6-1P78426 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NKX6-1P78426 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.2□□□□□ -1.42
NKX6-1P78426 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
NKX6-1P78426 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NKX6-1P78426 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NKX6-1P78426 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NKX6-1P78426 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
NKX6-1P78426 WBP11P1-201ENST00000562560 1931 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms