Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.02□□□□□ -1.45
PTPN6P29350 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.02□□□□□ -1.45
PTPN6P29350 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PTPN6P29350 AP003486.1-201ENST00000525716 3994 ntBASIC6.02□□□□□ -1.45
PTPN6P29350 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.02□□□□□ -1.45
PTPN6P29350 RNA5SP478-201ENST00000364657 115 ntBASIC6.02□□□□□ -1.45
PTPN6P29350 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PTPN6P29350 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PTPN6P29350 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.02□□□□□ -1.45
PTPN6P29350 VIM2P-201ENST00000402383 1294 ntBASIC6.02□□□□□ -1.45
PTPN6P29350 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.02□□□□□ -1.45
PTPN6P29350 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.02□□□□□ -1.45
PTPN6P29350 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.02□□□□□ -1.45
PTPN6P29350 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.02□□□□□ -1.45
PTPN6P29350 BMP6P1-201ENST00000431230 679 ntBASIC6.02□□□□□ -1.45
PTPN6P29350 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.02□□□□□ -1.45
PTPN6P29350 AC092601.1-201ENST00000444526 383 ntBASIC6.02□□□□□ -1.45
PTPN6P29350 OR13K1P-201ENST00000444577 975 ntBASIC6.02□□□□□ -1.45
PTPN6P29350 AC114728.1-201ENST00000488289 483 ntBASIC6.02□□□□□ -1.45
PTPN6P29350 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.02□□□□□ -1.45
PTPN6P29350 AC093870.1-201ENST00000506837 213 ntBASIC6.02□□□□□ -1.45
PTPN6P29350 NPM1P21-201ENST00000513394 762 ntBASIC6.02□□□□□ -1.45
PTPN6P29350 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.02□□□□□ -1.45
PTPN6P29350 COX6B1P4-201ENST00000519826 484 ntBASIC6.02□□□□□ -1.45
PTPN6P29350 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.02□□□□□ -1.45
PTPN6P29350 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.02□□□□□ -1.45
PTPN6P29350 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.02□□□□□ -1.45
PTPN6P29350 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.02□□□□□ -1.45
PTPN6P29350 AC004805.3-201ENST00000603178 310 ntBASIC6.02□□□□□ -1.45
PTPN6P29350 AC019257.2-201ENST00000605539 497 ntBASIC6.02□□□□□ -1.45
PTPN6P29350 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.02□□□□□ -1.45
PTPN6P29350 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.02□□□□□ -1.45
PTPN6P29350 MIR6889-201ENST00000613185 59 ntBASIC6.02□□□□□ -1.45
PTPN6P29350 AL512356.3-201ENST00000623005 461 ntBASIC6.02□□□□□ -1.45
PTPN6P29350 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.02□□□□□ -1.45
PTPN6P29350 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
PTPN6P29350 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PTPN6P29350 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
PTPN6P29350 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PTPN6P29350 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.01□□□□□ -1.45
PTPN6P29350 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
PTPN6P29350 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
PTPN6P29350 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
PTPN6P29350 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
PTPN6P29350 SHQ1P1-201ENST00000437111 1544 ntBASIC6.01□□□□□ -1.45
PTPN6P29350 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PTPN6P29350 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
PTPN6P29350 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PTPN6P29350 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PTPN6P29350 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PTPN6P29350 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.01□□□□□ -1.45
PTPN6P29350 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PTPN6P29350 SMC4P1-201ENST00000414479 527 ntBASIC6.01□□□□□ -1.45
PTPN6P29350 AC083862.1-201ENST00000427378 1242 ntBASIC6.01□□□□□ -1.45
PTPN6P29350 LDHAP2-201ENST00000437325 985 ntBASIC6.01□□□□□ -1.45
PTPN6P29350 AL020997.1-201ENST00000446554 349 ntBASIC6.01□□□□□ -1.45
PTPN6P29350 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
PTPN6P29350 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.01□□□□□ -1.45
PTPN6P29350 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.01□□□□□ -1.45
PTPN6P29350 RN7SL413P-201ENST00000482700 297 ntBASIC6.01□□□□□ -1.45
PTPN6P29350 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
PTPN6P29350 AC112184.1-201ENST00000505179 312 ntBASIC6.01□□□□□ -1.45
PTPN6P29350 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.01□□□□□ -1.45
PTPN6P29350 AC106800.3-201ENST00000511389 308 ntBASIC6.01□□□□□ -1.45
PTPN6P29350 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.01□□□□□ -1.45
PTPN6P29350 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.01□□□□□ -1.45
PTPN6P29350 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.01□□□□□ -1.45
PTPN6P29350 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PTPN6P29350 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.01□□□□□ -1.45
PTPN6P29350 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.01□□□□□ -1.45
PTPN6P29350 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.01□□□□□ -1.45
PTPN6P29350 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC6.01□□□□□ -1.45
PTPN6P29350 AC009120.3-201ENST00000563335 499 ntBASIC6.01□□□□□ -1.45
PTPN6P29350 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.01□□□□□ -1.45
PTPN6P29350 RN7SL475P-201ENST00000583379 298 ntBASIC6.01□□□□□ -1.45
PTPN6P29350 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.01□□□□□ -1.45
PTPN6P29350 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.01□□□□□ -1.45
PTPN6P29350 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.01□□□□□ -1.45
PTPN6P29350 IPO5-229ENST00000631030 192 ntTSL 5 BASIC6.01□□□□□ -1.45
PTPN6P29350 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.01□□□□□ -1.45
PTPN6P29350 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.01□□□□□ -1.45
PTPN6P29350 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.01□□□□□ -1.45
PTPN6P29350 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PTPN6P29350 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
PTPN6P29350 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PTPN6P29350 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.01□□□□□ -1.45
PTPN6P29350 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.01□□□□□ -1.45
PTPN6P29350 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
PTPN6P29350 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PTPN6P29350 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PTPN6P29350 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6□□□□□ -1.45
PTPN6P29350 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PTPN6P29350 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PTPN6P29350 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6□□□□□ -1.45
PTPN6P29350 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6□□□□□ -1.45
PTPN6P29350 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PTPN6P29350 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6□□□□□ -1.45
PTPN6P29350 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PTPN6P29350 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
PTPN6P29350 SNORA64.3-201ENST00000365647 134 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms