Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AC126474.2-201ENST00000623268 1750 ntBASIC7.81□□□□□ -1.16
RARAP10276 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RARAP10276 GTF2IP1-202ENST00000614592 2047 ntBASIC7.81□□□□□ -1.16
RARAP10276 AC061975.7-201ENST00000592016 2692 ntBASIC7.81□□□□□ -1.16
RARAP10276 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RARAP10276 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RARAP10276 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RARAP10276 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC7.81□□□□□ -1.16
RARAP10276 SALL4P7-201ENST00000555779 3120 ntBASIC7.81□□□□□ -1.16
RARAP10276 LRRC37A9P-201ENST00000603850 5376 ntBASIC7.8□□□□□ -1.16
RARAP10276 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
RARAP10276 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
RARAP10276 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
RARAP10276 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
RARAP10276 FAM3C2-201ENST00000312214 681 ntBASIC7.8□□□□□ -1.16
RARAP10276 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
RARAP10276 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RARAP10276 RNA5SP483-201ENST00000363431 118 ntBASIC7.8□□□□□ -1.16
RARAP10276 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RARAP10276 RNU6-413P-201ENST00000384115 107 ntBASIC7.8□□□□□ -1.16
RARAP10276 Y_RNA.560-201ENST00000384689 102 ntBASIC7.8□□□□□ -1.16
RARAP10276 RNU6-932P-201ENST00000391108 106 ntBASIC7.8□□□□□ -1.16
RARAP10276 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.8□□□□□ -1.16
RARAP10276 RN7SKP225-201ENST00000410405 352 ntBASIC7.8□□□□□ -1.16
RARAP10276 RN7SKP89-201ENST00000410774 242 ntBASIC7.8□□□□□ -1.16
RARAP10276 MTND1P21-201ENST00000412991 285 ntBASIC7.8□□□□□ -1.16
RARAP10276 AC006960.1-201ENST00000419980 153 ntBASIC7.8□□□□□ -1.16
RARAP10276 SNX18P3-201ENST00000424993 835 ntBASIC7.8□□□□□ -1.16
RARAP10276 AC092646.1-201ENST00000427142 901 ntBASIC7.8□□□□□ -1.16
RARAP10276 RNF11P2-201ENST00000427702 440 ntBASIC7.8□□□□□ -1.16
RARAP10276 AC130472.1-201ENST00000427885 309 ntBASIC7.8□□□□□ -1.16
RARAP10276 AL354941.1-201ENST00000438600 464 ntBASIC7.8□□□□□ -1.16
RARAP10276 UBE2V1P7-201ENST00000446395 340 ntBASIC7.8□□□□□ -1.16
RARAP10276 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC7.8□□□□□ -1.16
RARAP10276 ELOCP23-201ENST00000452014 332 ntBASIC7.8□□□□□ -1.16
RARAP10276 RPS29P5-201ENST00000452777 171 ntBASIC7.8□□□□□ -1.16
RARAP10276 SUN3-208ENST00000453192 801 ntTSL 5 BASIC7.8□□□□□ -1.16
RARAP10276 AC026348.1-201ENST00000462549 1053 ntBASIC7.8□□□□□ -1.16
RARAP10276 AC063955.1-201ENST00000462872 685 ntBASIC7.8□□□□□ -1.16
RARAP10276 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC7.8□□□□□ -1.16
RARAP10276 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC7.8□□□□□ -1.16
RARAP10276 AC023050.1-201ENST00000498198 304 ntBASIC7.8□□□□□ -1.16
RARAP10276 AC021087.2-201ENST00000504656 1203 ntBASIC7.8□□□□□ -1.16
RARAP10276 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC7.8□□□□□ -1.16
RARAP10276 FGB-207ENST00000509493 1164 ntTSL 5 BASIC7.8□□□□□ -1.16
RARAP10276 AC021146.7-201ENST00000509604 775 ntBASIC7.8□□□□□ -1.16
RARAP10276 AC091965.2-201ENST00000512324 613 ntBASIC7.8□□□□□ -1.16
RARAP10276 ADI1P2-201ENST00000514945 429 ntBASIC7.8□□□□□ -1.16
RARAP10276 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC7.8□□□□□ -1.16
RARAP10276 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC7.8□□□□□ -1.16
RARAP10276 HIGD1AP10-201ENST00000527837 282 ntBASIC7.8□□□□□ -1.16
RARAP10276 OR7E96P-201ENST00000530816 976 ntBASIC7.8□□□□□ -1.16
RARAP10276 AP002004.1-206ENST00000532441 876 ntBASIC7.8□□□□□ -1.16
RARAP10276 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RARAP10276 AHI1-217ENST00000534469 680 ntTSL 3 BASIC7.8□□□□□ -1.16
RARAP10276 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC7.8□□□□□ -1.16
RARAP10276 AP002383.5-201ENST00000542623 1161 ntBASIC7.8□□□□□ -1.16
RARAP10276 AC087883.1-201ENST00000551882 391 ntBASIC7.8□□□□□ -1.16
RARAP10276 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RARAP10276 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC7.8□□□□□ -1.16
RARAP10276 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC7.8□□□□□ -1.16
RARAP10276 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RARAP10276 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC7.8□□□□□ -1.16
RARAP10276 VN1R83P-201ENST00000595685 445 ntBASIC7.8□□□□□ -1.16
RARAP10276 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC7.8□□□□□ -1.16
RARAP10276 AC021749.1-201ENST00000604322 607 ntBASIC7.8□□□□□ -1.16
RARAP10276 AC103724.4-201ENST00000605981 292 ntBASIC7.8□□□□□ -1.16
RARAP10276 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC7.8□□□□□ -1.16
RARAP10276 AC126118.1-201ENST00000607744 628 ntBASIC7.8□□□□□ -1.16
RARAP10276 AL359513.1-201ENST00000614364 557 ntBASIC7.8□□□□□ -1.16
RARAP10276 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
RARAP10276 AC016582.3-206ENST00000636547 207 ntBASIC7.8□□□□□ -1.16
RARAP10276 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RARAP10276 ZNF840P-201ENST00000504759 1996 ntBASIC7.8□□□□□ -1.16
RARAP10276 EEF1A1P5-201ENST00000436459 1389 ntBASIC7.8□□□□□ -1.16
RARAP10276 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC7.8□□□□□ -1.16
RARAP10276 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
RARAP10276 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
RARAP10276 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.8□□□□□ -1.16
RARAP10276 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RARAP10276 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RARAP10276 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.8□□□□□ -1.16
RARAP10276 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RARAP10276 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
RARAP10276 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
RARAP10276 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
RARAP10276 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC7.79□□□□□ -1.16
RARAP10276 OR10AB1P-202ENST00000641219 1686 ntBASIC7.79□□□□□ -1.16
RARAP10276 AC087045.3-201ENST00000623046 2468 ntBASIC7.79□□□□□ -1.16
RARAP10276 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RARAP10276 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.79□□□□□ -1.16
RARAP10276 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
RARAP10276 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
RARAP10276 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RARAP10276 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
RARAP10276 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
RARAP10276 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RARAP10276 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.79□□□□□ -1.16
RARAP10276 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RARAP10276 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms