Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RNA5SP440-201ENST00000612665 119 ntBASIC7.1□□□□□ -1.27
HOXC6P09630 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.1□□□□□ -1.27
HOXC6P09630 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.1□□□□□ -1.27
HOXC6P09630 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.1□□□□□ -1.27
HOXC6P09630 AL132640.3-201ENST00000630473 177 ntBASIC7.1□□□□□ -1.27
HOXC6P09630 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HOXC6P09630 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.1□□□□□ -1.27
HOXC6P09630 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HOXC6P09630 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.1□□□□□ -1.27
HOXC6P09630 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HOXC6P09630 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HOXC6P09630 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HOXC6P09630 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HOXC6P09630 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
HOXC6P09630 AC015689.2-201ENST00000528172 1738 ntBASIC7.1□□□□□ -1.27
HOXC6P09630 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.1□□□□□ -1.27
HOXC6P09630 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.09□□□□□ -1.27
HOXC6P09630 AC062029.1-202ENST00000606164 3651 ntBASIC7.09□□□□□ -1.27
HOXC6P09630 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HOXC6P09630 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC7.09□□□□□ -1.27
HOXC6P09630 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.09□□□□□ -1.27
HOXC6P09630 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.09□□□□□ -1.27
HOXC6P09630 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HOXC6P09630 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HOXC6P09630 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
HOXC6P09630 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.09□□□□□ -1.27
HOXC6P09630 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HOXC6P09630 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
HOXC6P09630 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.09□□□□□ -1.27
HOXC6P09630 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HOXC6P09630 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
HOXC6P09630 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HOXC6P09630 RNA5SP242-201ENST00000364171 118 ntBASIC7.09□□□□□ -1.27
HOXC6P09630 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
HOXC6P09630 MIR1203-201ENST00000408812 85 ntBASIC7.09□□□□□ -1.27
HOXC6P09630 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.09□□□□□ -1.27
HOXC6P09630 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HOXC6P09630 AL035660.1-201ENST00000422041 222 ntBASIC7.09□□□□□ -1.27
HOXC6P09630 AL139415.1-201ENST00000424862 352 ntBASIC7.09□□□□□ -1.27
HOXC6P09630 BRWD1P3-201ENST00000428816 390 ntBASIC7.09□□□□□ -1.27
HOXC6P09630 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC7.09□□□□□ -1.27
HOXC6P09630 NDUFS5P5-201ENST00000437256 321 ntBASIC7.09□□□□□ -1.27
HOXC6P09630 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.09□□□□□ -1.27
HOXC6P09630 TRIM60P16-201ENST00000444048 694 ntBASIC7.09□□□□□ -1.27
HOXC6P09630 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC7.09□□□□□ -1.27
HOXC6P09630 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.09□□□□□ -1.27
HOXC6P09630 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC7.09□□□□□ -1.27
HOXC6P09630 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC7.09□□□□□ -1.27
HOXC6P09630 TMEM97P2-201ENST00000517841 403 ntBASIC7.09□□□□□ -1.27
HOXC6P09630 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.09□□□□□ -1.27
HOXC6P09630 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.09□□□□□ -1.27
HOXC6P09630 AC092121.1-201ENST00000569452 202 ntBASIC7.09□□□□□ -1.27
HOXC6P09630 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.09□□□□□ -1.27
HOXC6P09630 MIR6809-201ENST00000612189 116 ntBASIC7.09□□□□□ -1.27
HOXC6P09630 AC016542.2-201ENST00000624201 619 ntBASIC7.09□□□□□ -1.27
HOXC6P09630 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
HOXC6P09630 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
HOXC6P09630 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HOXC6P09630 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
HOXC6P09630 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
HOXC6P09630 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.28
HOXC6P09630 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HOXC6P09630 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
HOXC6P09630 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
HOXC6P09630 AC092725.2-201ENST00000567658 1389 ntBASIC7.08□□□□□ -1.28
HOXC6P09630 CR788268.1-201ENST00000603931 1809 ntBASIC7.08□□□□□ -1.28
HOXC6P09630 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HOXC6P09630 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HOXC6P09630 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HOXC6P09630 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HOXC6P09630 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HOXC6P09630 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.08□□□□□ -1.28
HOXC6P09630 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HOXC6P09630 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
HOXC6P09630 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7.08□□□□□ -1.28
HOXC6P09630 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.08□□□□□ -1.28
HOXC6P09630 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
HOXC6P09630 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.08□□□□□ -1.28
HOXC6P09630 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.08□□□□□ -1.28
HOXC6P09630 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
HOXC6P09630 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
HOXC6P09630 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.08□□□□□ -1.28
HOXC6P09630 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC7.08□□□□□ -1.28
HOXC6P09630 AP006222.1-205ENST00000450734 457 ntBASIC7.08□□□□□ -1.28
HOXC6P09630 UBFD1P1-201ENST00000473259 814 ntBASIC7.08□□□□□ -1.28
HOXC6P09630 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.08□□□□□ -1.28
HOXC6P09630 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC7.08□□□□□ -1.28
HOXC6P09630 AC114781.3-201ENST00000512083 142 ntBASIC7.08□□□□□ -1.28
HOXC6P09630 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC7.08□□□□□ -1.28
HOXC6P09630 AC027308.1-201ENST00000517993 110 ntBASIC7.08□□□□□ -1.28
HOXC6P09630 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC7.08□□□□□ -1.28
HOXC6P09630 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.08□□□□□ -1.28
HOXC6P09630 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HOXC6P09630 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC7.08□□□□□ -1.28
HOXC6P09630 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC7.08□□□□□ -1.28
HOXC6P09630 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.08□□□□□ -1.28
HOXC6P09630 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HOXC6P09630 AC005244.1-201ENST00000582566 339 ntBASIC7.08□□□□□ -1.28
HOXC6P09630 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.08□□□□□ -1.28
HOXC6P09630 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms