Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC098847.1-201ENST00000473094 348 ntBASIC7.46□□□□□ -1.22
HLA-DOAP06340 RPL34P33-201ENST00000486062 334 ntBASIC7.46□□□□□ -1.22
HLA-DOAP06340 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.46□□□□□ -1.22
HLA-DOAP06340 AC130365.2-201ENST00000525882 1201 ntBASIC7.46□□□□□ -1.22
HLA-DOAP06340 AP004609.2-201ENST00000532177 190 ntBASIC7.46□□□□□ -1.22
HLA-DOAP06340 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC7.46□□□□□ -1.22
HLA-DOAP06340 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC7.46□□□□□ -1.22
HLA-DOAP06340 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.46□□□□□ -1.22
HLA-DOAP06340 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC7.46□□□□□ -1.22
HLA-DOAP06340 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.46□□□□□ -1.22
HLA-DOAP06340 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.46□□□□□ -1.22
HLA-DOAP06340 AC067773.1-201ENST00000603284 1094 ntBASIC7.46□□□□□ -1.22
HLA-DOAP06340 AC004801.6-201ENST00000616571 978 ntBASIC7.46□□□□□ -1.22
HLA-DOAP06340 AC073862.4-201ENST00000622982 854 ntBASIC7.46□□□□□ -1.22
HLA-DOAP06340 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
HLA-DOAP06340 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
HLA-DOAP06340 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
HLA-DOAP06340 AC007114.2-201ENST00000576014 4281 ntBASIC7.46□□□□□ -1.22
HLA-DOAP06340 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.46□□□□□ -1.22
HLA-DOAP06340 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.46□□□□□ -1.22
HLA-DOAP06340 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC7.46□□□□□ -1.22
HLA-DOAP06340 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
HLA-DOAP06340 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.22
HLA-DOAP06340 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
HLA-DOAP06340 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC7.46□□□□□ -1.22
HLA-DOAP06340 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
HLA-DOAP06340 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC7.46□□□□□ -1.22
HLA-DOAP06340 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.46□□□□□ -1.22
HLA-DOAP06340 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
HLA-DOAP06340 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
HLA-DOAP06340 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
HLA-DOAP06340 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-DOAP06340 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-DOAP06340 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-DOAP06340 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-DOAP06340 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-DOAP06340 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC7.45□□□□□ -1.22
HLA-DOAP06340 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-DOAP06340 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-DOAP06340 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-DOAP06340 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.45□□□□□ -1.22
HLA-DOAP06340 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-DOAP06340 U3.43-201ENST00000410734 213 ntBASIC7.45□□□□□ -1.22
HLA-DOAP06340 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC7.45□□□□□ -1.22
HLA-DOAP06340 AL389925.1-201ENST00000432257 728 ntBASIC7.45□□□□□ -1.22
HLA-DOAP06340 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC7.45□□□□□ -1.22
HLA-DOAP06340 OR3D1P-201ENST00000438288 955 ntBASIC7.45□□□□□ -1.22
HLA-DOAP06340 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.45□□□□□ -1.22
HLA-DOAP06340 MORF4-201ENST00000447135 971 ntBASIC7.45□□□□□ -1.22
HLA-DOAP06340 PPIAP27-201ENST00000453800 265 ntBASIC7.45□□□□□ -1.22
HLA-DOAP06340 AC023194.2-201ENST00000465398 406 ntBASIC7.45□□□□□ -1.22
HLA-DOAP06340 SUMO2P7-201ENST00000511179 285 ntBASIC7.45□□□□□ -1.22
HLA-DOAP06340 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.45□□□□□ -1.22
HLA-DOAP06340 IGKV3D-25-201ENST00000519599 235 ntBASIC7.45□□□□□ -1.22
HLA-DOAP06340 AC084337.1-201ENST00000524809 686 ntBASIC7.45□□□□□ -1.22
HLA-DOAP06340 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC7.45□□□□□ -1.22
HLA-DOAP06340 AP000662.1-201ENST00000530952 487 ntBASIC7.45□□□□□ -1.22
HLA-DOAP06340 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC7.45□□□□□ -1.22
HLA-DOAP06340 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC7.45□□□□□ -1.22
HLA-DOAP06340 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.45□□□□□ -1.22
HLA-DOAP06340 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC7.45□□□□□ -1.22
HLA-DOAP06340 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC7.45□□□□□ -1.22
HLA-DOAP06340 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-DOAP06340 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC7.45□□□□□ -1.22
HLA-DOAP06340 AC009120.3-201ENST00000563335 499 ntBASIC7.45□□□□□ -1.22
HLA-DOAP06340 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC7.45□□□□□ -1.22
HLA-DOAP06340 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC7.45□□□□□ -1.22
HLA-DOAP06340 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-DOAP06340 NF1P10-201ENST00000613227 742 ntBASIC7.45□□□□□ -1.22
HLA-DOAP06340 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC7.45□□□□□ -1.22
HLA-DOAP06340 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC7.45□□□□□ -1.22
HLA-DOAP06340 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC7.45□□□□□ -1.22
HLA-DOAP06340 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
HLA-DOAP06340 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-DOAP06340 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-DOAP06340 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.45□□□□□ -1.22
HLA-DOAP06340 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.45□□□□□ -1.22
HLA-DOAP06340 AC022417.1-201ENST00000624768 1303 ntBASIC7.45□□□□□ -1.22
HLA-DOAP06340 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-DOAP06340 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-DOAP06340 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.45□□□□□ -1.22
HLA-DOAP06340 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-DOAP06340 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC7.45□□□□□ -1.22
HLA-DOAP06340 AC093829.1-201ENST00000506662 1618 ntBASIC7.45□□□□□ -1.22
HLA-DOAP06340 AL033543.1-201ENST00000623440 13454 ntBASIC7.45□□□□□ -1.22
HLA-DOAP06340 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
HLA-DOAP06340 USP40-202ENST00000409945 1946 ntTSL 2 BASIC7.44□□□□□ -1.22
HLA-DOAP06340 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.44□□□□□ -1.22
HLA-DOAP06340 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
HLA-DOAP06340 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.44□□□□□ -1.22
HLA-DOAP06340 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
HLA-DOAP06340 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.44□□□□□ -1.22
HLA-DOAP06340 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
HLA-DOAP06340 CUBNP3-201ENST00000457461 1784 ntBASIC7.44□□□□□ -1.22
HLA-DOAP06340 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
HLA-DOAP06340 MAPK10-344ENST00000641718 3746 ntBASIC7.44□□□□□ -1.22
HLA-DOAP06340 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
HLA-DOAP06340 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
HLA-DOAP06340 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
HLA-DOAP06340 AC105235.1-201ENST00000623208 1816 ntBASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms