Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SOX1O00570 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SOX1O00570 GAPDHP61-201ENST00000507324 1005 ntBASIC7.7□□□□□ -1.18
SOX1O00570 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC7.7□□□□□ -1.18
SOX1O00570 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC7.7□□□□□ -1.18
SOX1O00570 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC7.7□□□□□ -1.18
SOX1O00570 NANOGNBP2-201ENST00000544753 553 ntBASIC7.7□□□□□ -1.18
SOX1O00570 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.7□□□□□ -1.18
SOX1O00570 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
SOX1O00570 ACTR3BP3-201ENST00000565577 979 ntBASIC7.7□□□□□ -1.18
SOX1O00570 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC7.7□□□□□ -1.18
SOX1O00570 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC7.7□□□□□ -1.18
SOX1O00570 AC008759.1-201ENST00000589783 983 ntBASIC7.7□□□□□ -1.18
SOX1O00570 AL163642.2-201ENST00000604722 1019 ntBASIC7.7□□□□□ -1.18
SOX1O00570 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SOX1O00570 MIR6768-201ENST00000610734 72 ntBASIC7.7□□□□□ -1.18
SOX1O00570 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC7.7□□□□□ -1.18
SOX1O00570 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SOX1O00570 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
SOX1O00570 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SOX1O00570 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SOX1O00570 CASC19-281ENST00000642118 1554 ntBASIC7.7□□□□□ -1.18
SOX1O00570 NEK2P4-201ENST00000425793 1329 ntBASIC7.7□□□□□ -1.18
SOX1O00570 NEK2P2-201ENST00000438441 1338 ntBASIC7.7□□□□□ -1.18
SOX1O00570 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
SOX1O00570 ADGRE1-204ENST00000381407 2687 ntTSL 2 BASIC7.7□□□□□ -1.18
SOX1O00570 EPHB2-201ENST00000374627 4014 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
SOX1O00570 WDR75-201ENST00000314761 2701 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SOX1O00570 ZNF610-207ENST00000601151 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
SOX1O00570 MAPK10-354ENST00000641823 2732 ntBASIC7.7□□□□□ -1.18
SOX1O00570 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC7.7□□□□□ -1.18
SOX1O00570 MIR137HG-205ENST00000634594 3586 ntTSL 5 BASIC7.7□□□□□ -1.18
SOX1O00570 CEP41-219ENST00000616628 3315 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SOX1O00570 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SOX1O00570 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SOX1O00570 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
SOX1O00570 AC092104.1-201ENST00000497346 1441 ntBASIC7.69□□□□□ -1.18
SOX1O00570 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC7.69□□□□□ -1.18
SOX1O00570 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC7.69□□□□□ -1.18
SOX1O00570 TTC33-201ENST00000337702 2612 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SOX1O00570 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
SOX1O00570 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
SOX1O00570 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SOX1O00570 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.69□□□□□ -1.18
SOX1O00570 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.69□□□□□ -1.18
SOX1O00570 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SOX1O00570 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SOX1O00570 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
SOX1O00570 NOLC1-209ENST00000605788 3932 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
SOX1O00570 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SOX1O00570 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
SOX1O00570 RNU6-236P-201ENST00000363886 106 ntBASIC7.69□□□□□ -1.18
SOX1O00570 OR5H15-201ENST00000383696 930 ntBASIC7.69□□□□□ -1.18
SOX1O00570 Y_RNA.472-201ENST00000384322 102 ntBASIC7.69□□□□□ -1.18
SOX1O00570 RNU6-83P-201ENST00000384568 112 ntBASIC7.69□□□□□ -1.18
SOX1O00570 U3.18-201ENST00000390880 216 ntBASIC7.69□□□□□ -1.18
SOX1O00570 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SOX1O00570 PSMA6P1-201ENST00000400275 741 ntBASIC7.69□□□□□ -1.18
SOX1O00570 TANK-206ENST00000406287 875 ntTSL 5 BASIC7.69□□□□□ -1.18
SOX1O00570 SNORA3.1-201ENST00000408166 111 ntBASIC7.69□□□□□ -1.18
SOX1O00570 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.69□□□□□ -1.18
SOX1O00570 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC7.69□□□□□ -1.18
SOX1O00570 BX119904.1-201ENST00000432026 348 ntBASIC7.69□□□□□ -1.18
SOX1O00570 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC7.69□□□□□ -1.18
SOX1O00570 AC013410.1-201ENST00000436223 1232 ntBASIC7.69□□□□□ -1.18
SOX1O00570 ELOCP8-201ENST00000439309 332 ntBASIC7.69□□□□□ -1.18
SOX1O00570 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC7.69□□□□□ -1.18
SOX1O00570 ELOCP15-201ENST00000442090 332 ntBASIC7.69□□□□□ -1.18
SOX1O00570 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.69□□□□□ -1.18
SOX1O00570 AC234781.3-201ENST00000452540 973 ntBASIC7.69□□□□□ -1.18
SOX1O00570 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC7.69□□□□□ -1.18
SOX1O00570 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC7.69□□□□□ -1.18
SOX1O00570 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC7.69□□□□□ -1.18
SOX1O00570 RPS7P7-201ENST00000463499 571 ntBASIC7.69□□□□□ -1.18
SOX1O00570 NPY6R-201ENST00000503807 1112 ntBASIC7.69□□□□□ -1.18
SOX1O00570 AC010460.1-201ENST00000507087 466 ntBASIC7.69□□□□□ -1.18
SOX1O00570 RN7SKP5-201ENST00000517045 272 ntBASIC7.69□□□□□ -1.18
SOX1O00570 RNU6-232P-201ENST00000517144 64 ntBASIC7.69□□□□□ -1.18
SOX1O00570 IGHVIII-13-1-201ENST00000517613 291 ntBASIC7.69□□□□□ -1.18
SOX1O00570 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC7.69□□□□□ -1.18
SOX1O00570 AC008429.4-201ENST00000521201 182 ntBASIC7.69□□□□□ -1.18
SOX1O00570 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC7.69□□□□□ -1.18
SOX1O00570 NDUFS5P6-201ENST00000529136 295 ntBASIC7.69□□□□□ -1.18
SOX1O00570 OR8I1P-201ENST00000529291 931 ntBASIC7.69□□□□□ -1.18
SOX1O00570 ERP27-202ENST00000540097 993 ntTSL 2 BASIC7.69□□□□□ -1.18
SOX1O00570 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.69□□□□□ -1.18
SOX1O00570 AC087897.1-201ENST00000550134 156 ntBASIC7.69□□□□□ -1.18
SOX1O00570 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
SOX1O00570 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC7.69□□□□□ -1.18
SOX1O00570 ULK4P1-202ENST00000565174 503 ntBASIC7.69□□□□□ -1.18
SOX1O00570 AC007346.1-201ENST00000569208 867 ntBASIC7.69□□□□□ -1.18
SOX1O00570 RN7SL366P-201ENST00000577957 292 ntBASIC7.69□□□□□ -1.18
SOX1O00570 EIF4A3P1-201ENST00000578499 647 ntBASIC7.69□□□□□ -1.18
SOX1O00570 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC7.69□□□□□ -1.18
SOX1O00570 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC7.69□□□□□ -1.18
SOX1O00570 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SOX1O00570 GLYATL1P2-202ENST00000588046 902 ntBASIC7.69□□□□□ -1.18
SOX1O00570 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC7.69□□□□□ -1.18
SOX1O00570 AC015802.2-201ENST00000589690 189 ntBASIC7.69□□□□□ -1.18
SOX1O00570 AC011447.2-201ENST00000592921 283 ntBASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms