Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
FOXN3O00409 SNORD35A-201ENST00000363389 86 ntBASIC6.91□□□□□ -1.3
FOXN3O00409 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC6.91□□□□□ -1.3
FOXN3O00409 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC6.91□□□□□ -1.3
FOXN3O00409 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
FOXN3O00409 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
FOXN3O00409 RAB5CP1-201ENST00000395972 580 ntBASIC6.91□□□□□ -1.3
FOXN3O00409 AL391419.1-201ENST00000398901 1275 ntBASIC6.91□□□□□ -1.3
FOXN3O00409 RN7SKP205-201ENST00000410999 307 ntBASIC6.91□□□□□ -1.3
FOXN3O00409 AL512504.1-201ENST00000415494 778 ntBASIC6.91□□□□□ -1.3
FOXN3O00409 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.91□□□□□ -1.3
FOXN3O00409 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC6.91□□□□□ -1.3
FOXN3O00409 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.91□□□□□ -1.3
FOXN3O00409 RPL17P35-201ENST00000432217 549 ntBASIC6.91□□□□□ -1.3
FOXN3O00409 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
FOXN3O00409 ZNF736P11Y-201ENST00000442535 1213 ntBASIC6.91□□□□□ -1.3
FOXN3O00409 ZNF736P12Y-201ENST00000443152 1243 ntBASIC6.91□□□□□ -1.3
FOXN3O00409 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.91□□□□□ -1.3
FOXN3O00409 RPS15AP29-201ENST00000445539 400 ntBASIC6.91□□□□□ -1.3
FOXN3O00409 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.91□□□□□ -1.3
FOXN3O00409 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.91□□□□□ -1.3
FOXN3O00409 ZNF736P4Y-201ENST00000454995 1243 ntBASIC6.91□□□□□ -1.3
FOXN3O00409 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.91□□□□□ -1.3
FOXN3O00409 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.91□□□□□ -1.3
FOXN3O00409 AC074386.1-206ENST00000487102 761 ntBASIC6.91□□□□□ -1.3
FOXN3O00409 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.91□□□□□ -1.3
FOXN3O00409 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.91□□□□□ -1.3
FOXN3O00409 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.91□□□□□ -1.3
FOXN3O00409 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
FOXN3O00409 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.91□□□□□ -1.3
FOXN3O00409 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.91□□□□□ -1.3
FOXN3O00409 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.91□□□□□ -1.3
FOXN3O00409 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.91□□□□□ -1.3
FOXN3O00409 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.91□□□□□ -1.3
FOXN3O00409 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.91□□□□□ -1.3
FOXN3O00409 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
FOXN3O00409 AC009032.1-201ENST00000617574 431 ntBASIC6.91□□□□□ -1.3
FOXN3O00409 MIR6085-201ENST00000618314 110 ntBASIC6.91□□□□□ -1.3
FOXN3O00409 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.91□□□□□ -1.3
FOXN3O00409 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
FOXN3O00409 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.91□□□□□ -1.3
FOXN3O00409 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
FOXN3O00409 AC005702.3-201ENST00000585345 1447 ntBASIC6.91□□□□□ -1.3
FOXN3O00409 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.91□□□□□ -1.3
FOXN3O00409 AC067942.1-201ENST00000488045 1493 ntBASIC6.91□□□□□ -1.3
FOXN3O00409 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.91□□□□□ -1.3
FOXN3O00409 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
FOXN3O00409 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.9□□□□□ -1.3
FOXN3O00409 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
FOXN3O00409 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
FOXN3O00409 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
FOXN3O00409 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
FOXN3O00409 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.9□□□□□ -1.3
FOXN3O00409 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.9□□□□□ -1.3
FOXN3O00409 CUL4AP1-201ENST00000514750 1863 ntBASIC6.9□□□□□ -1.3
FOXN3O00409 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
FOXN3O00409 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.9□□□□□ -1.3
FOXN3O00409 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.9□□□□□ -1.3
FOXN3O00409 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
FOXN3O00409 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
FOXN3O00409 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.9□□□□□ -1.3
FOXN3O00409 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
FOXN3O00409 U3.43-201ENST00000410734 213 ntBASIC6.9□□□□□ -1.3
FOXN3O00409 RNA5SP115-201ENST00000411160 107 ntBASIC6.9□□□□□ -1.3
FOXN3O00409 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.9□□□□□ -1.3
FOXN3O00409 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
FOXN3O00409 AC013470.3-201ENST00000420252 1194 ntBASIC6.9□□□□□ -1.3
FOXN3O00409 AL445528.1-201ENST00000426330 420 ntBASIC6.9□□□□□ -1.3
FOXN3O00409 AC083862.1-201ENST00000427378 1242 ntBASIC6.9□□□□□ -1.3
FOXN3O00409 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.9□□□□□ -1.3
FOXN3O00409 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.9□□□□□ -1.3
FOXN3O00409 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
FOXN3O00409 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
FOXN3O00409 EIF4E2P2-201ENST00000492033 736 ntBASIC6.9□□□□□ -1.3
FOXN3O00409 AC093664.1-201ENST00000511779 289 ntBASIC6.9□□□□□ -1.3
FOXN3O00409 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.9□□□□□ -1.3
FOXN3O00409 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.9□□□□□ -1.3
FOXN3O00409 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.9□□□□□ -1.3
FOXN3O00409 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
FOXN3O00409 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.9□□□□□ -1.3
FOXN3O00409 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.9□□□□□ -1.3
FOXN3O00409 RN7SL475P-201ENST00000583379 298 ntBASIC6.9□□□□□ -1.3
FOXN3O00409 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.9□□□□□ -1.3
FOXN3O00409 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.9□□□□□ -1.3
FOXN3O00409 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.9□□□□□ -1.3
FOXN3O00409 AC004805.3-201ENST00000603178 310 ntBASIC6.9□□□□□ -1.3
FOXN3O00409 AL583832.1-201ENST00000603227 784 ntBASIC6.9□□□□□ -1.3
FOXN3O00409 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.9□□□□□ -1.3
FOXN3O00409 AC012175.1-201ENST00000603755 531 ntBASIC6.9□□□□□ -1.3
FOXN3O00409 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.9□□□□□ -1.3
FOXN3O00409 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.9□□□□□ -1.3
FOXN3O00409 LINC00216-201ENST00000623548 1126 ntBASIC6.9□□□□□ -1.3
FOXN3O00409 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
FOXN3O00409 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.9□□□□□ -1.31
FOXN3O00409 AL353743.3-201ENST00000442109 1468 ntBASIC6.9□□□□□ -1.31
FOXN3O00409 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.9□□□□□ -1.31
FOXN3O00409 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
FOXN3O00409 CDY11P-201ENST00000447168 1651 ntBASIC6.9□□□□□ -1.31
FOXN3O00409 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.9□□□□□ -1.31
FOXN3O00409 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms