Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 MIR1273F-201ENST00000580581 99 ntBASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 AC091133.5-201ENST00000603088 301 ntBASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 AL161912.3-201ENST00000605404 628 ntBASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 AC010320.5-201ENST00000619124 676 ntBASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 AL357153.4-201ENST00000620487 1016 ntBASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 PARP4P2-201ENST00000446672 3326 ntBASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 AC096921.2-201ENST00000561507 1916 ntBASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 LDHAP5-201ENST00000394996 622 ntBASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 AL451061.1-201ENST00000407887 862 ntBASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 MRPS21P5-201ENST00000417885 231 ntBASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 AL354766.1-201ENST00000423396 542 ntBASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 RPL7AP71-201ENST00000451120 739 ntBASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 NDUFB4P1-201ENST00000462398 381 ntBASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 DEFB109A-201ENST00000482450 265 ntBASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 MTCO1P55-201ENST00000489829 745 ntBASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 RPL10P7-201ENST00000495649 625 ntBASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 AC010343.2-201ENST00000510162 224 ntBASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 REG4-204ENST00000530654 612 ntTSL 5 BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 MIR5705-201ENST00000579870 89 ntBASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 MIR6085-201ENST00000618314 110 ntBASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 AP003072.5-201ENST00000623872 773 ntBASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 AL035425.4-201ENST00000624509 1063 ntBASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 AC003992.1-201ENST00000635364 557 ntBASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
KCNIP3Q9Y2W7 MRRFP1-201ENST00000435941 1675 ntBASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 CDY11P-201ENST00000447168 1651 ntBASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 AC093849.1-201ENST00000563631 2209 ntBASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 RBPJP6-201ENST00000411556 1431 ntBASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 GUCY1B2-204ENST00000531898 1979 ntBASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms