Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 KATNBL1P1-201ENST00000605192 748 ntBASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 AC010333.3-201ENST00000615100 402 ntBASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 AL163152.1-201ENST00000642001 374 ntBASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 DNM1P47-203ENST00000571780 12667 ntBASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 RNU1-84P-201ENST00000365447 164 ntBASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 RPL9P21-201ENST00000392269 505 ntBASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 RNA5SP115-201ENST00000411160 107 ntBASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 NAP1L4P3-201ENST00000432820 1147 ntBASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 SETP12-201ENST00000514068 805 ntBASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 AC073581.1-201ENST00000519036 575 ntBASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 AC002519.2-203ENST00000567043 837 ntBASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 AL078601.3-201ENST00000573303 535 ntBASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 OR1E3-201ENST00000575608 948 ntBASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 AC026898.1-201ENST00000586404 571 ntBASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 SNORD96A-201ENST00000606577 79 ntBASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 AC016590.3-201ENST00000611171 753 ntBASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 U1.41-201ENST00000617626 165 ntBASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 RFC1-217ENST00000639695 867 ntTSL 5 BASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 AC007114.2-201ENST00000576014 4281 ntBASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 AC130360.2-201ENST00000533477 1556 ntBASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
SSX2IPQ9Y2D8 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 NCOA4P2-201ENST00000340589 1813 ntBASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 FUNDC2P3-201ENST00000334716 533 ntBASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 RNA5SP198-201ENST00000410376 127 ntBASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 RN7SKP271-201ENST00000410528 320 ntBASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 RNU4-64P-201ENST00000410795 131 ntBASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 AL359092.1-201ENST00000417156 265 ntBASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 GTF3AP6-201ENST00000432585 986 ntBASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 XKRYP6-201ENST00000440468 1116 ntBASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 XKRYP3-201ENST00000442113 1116 ntBASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 POU5F1P5-201ENST00000445059 658 ntBASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 NFU1-207ENST00000462320 558 ntTSL 4 BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 AC108103.1-201ENST00000511286 446 ntBASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 AC011352.2-201ENST00000514574 1016 ntBASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 HSD3BP3-201ENST00000514706 994 ntBASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 SNORD116-30-201ENST00000516468 85 ntBASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 PVT1-214ENST00000522875 922 ntTSL 5 BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms