Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 STMND1-203ENST00000536551 1322 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 LINC01133-203ENST00000635112 1996 ntTSL 5 BASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 SNORD3G-201ENST00000362796 215 ntBASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 RNU6-433P-201ENST00000363216 104 ntBASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 Y_RNA.184-201ENST00000363884 108 ntBASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 LEMD1-202ENST00000367151 869 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 GSTA5-202ENST00000370989 892 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 MAS1L-201ENST00000377127 1260 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 AL162578.1-201ENST00000406202 378 ntBASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 NPM1P40-201ENST00000412758 733 ntBASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 LINC01687-202ENST00000419467 465 ntTSL 3 BASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 HCG21-204ENST00000419481 605 ntTSL 3 BASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 PIGFP2-201ENST00000421400 651 ntBASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 RPSAP32-201ENST00000432681 526 ntBASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 AC010240.2-201ENST00000445363 1205 ntBASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 AC006463.1-201ENST00000445929 232 ntBASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 AC079448.1-201ENST00000449377 373 ntBASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 AC091685.2-201ENST00000454924 864 ntBASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 C1DP4-201ENST00000455429 424 ntBASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 AC117395.1-201ENST00000487390 403 ntBASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 TDGF1P3-201ENST00000493351 567 ntBASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 SETP14-201ENST00000497538 873 ntBASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 SRD5A3-AS1-202ENST00000510637 926 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 AC114797.1-201ENST00000514003 728 ntBASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 ATOX1-202ENST00000520382 466 ntTSL 5 BASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 ARL6IP1P1-201ENST00000545836 610 ntBASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 AL049634.2-203ENST00000564763 588 ntAPPRIS ALT2 TSL 4 BASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 VN1R67P-201ENST00000568379 913 ntBASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 CNTNAP3P1-201ENST00000616657 906 ntBASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 RFPL3-AS1_1.1-201ENST00000617561 88 ntBASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 AL391987.5-201ENST00000618472 412 ntBASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 AC068722.2-201ENST00000618734 544 ntBASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 Metazoa_SRP.45-201ENST00000620896 299 ntBASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 RPSAP68-201ENST00000625020 438 ntBASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 THG1L-201ENST00000231198 3107 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 AL359924.1-201ENST00000450451 3127 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 BRDT-203ENST00000370389 3696 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 AC055716.2-201ENST00000552545 2441 ntBASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC8.65□□□□□ -1.02
VPS9D1Q9Y2B5 MATN2-208ENST00000520016 3495 ntAPPRIS P4 TSL 1 (best) BASIC8.65□□□□□ -1.03
VPS9D1Q9Y2B5 UBAP2L-220ENST00000613315 3451 ntTSL 2 BASIC8.65□□□□□ -1.03
VPS9D1Q9Y2B5 AMPH-202ENST00000356264 3418 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
VPS9D1Q9Y2B5 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
VPS9D1Q9Y2B5 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
VPS9D1Q9Y2B5 CCT5P1-201ENST00000502314 1618 ntBASIC8.65□□□□□ -1.03
VPS9D1Q9Y2B5 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC8.65□□□□□ -1.03
VPS9D1Q9Y2B5 SRPK2-214ENST00000489828 2560 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
VPS9D1Q9Y2B5 ZNF185-203ENST00000324823 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
VPS9D1Q9Y2B5 RIOK3P1-201ENST00000418778 1528 ntBASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 AC006299.1-203ENST00000499625 2029 ntTSL 5 BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 MAGI2-214ENST00000628781 2013 ntTSL 2 BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 STARD5-201ENST00000302824 4871 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 PTK2-203ENST00000430260 1940 ntTSL 2 BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 SLC8A1-209ENST00000408028 2898 ntTSL 5 BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 LACTB2-AS1-201ENST00000499227 3716 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 LINC01915-201ENST00000577994 2321 ntTSL 2 BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 SKAP2-201ENST00000345317 3998 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 CCDC15-201ENST00000344762 3893 ntAPPRIS P2 TSL 5 BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 AL033381.1-201ENST00000314040 3435 ntTSL 2 BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 Y_RNA.47-201ENST00000362697 108 ntBASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 TRAV8-6-201ENST00000390443 561 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 U3.18-201ENST00000390880 216 ntBASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 MTND3P8-201ENST00000412909 339 ntBASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 TYROBP-202ENST00000424586 541 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 RALY-AS1-202ENST00000432859 610 ntTSL 3 BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 LYPLA1P1-201ENST00000434514 622 ntBASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 HMGB1P18-201ENST00000438801 619 ntBASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 ASS1P11-201ENST00000441309 1216 ntBASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 AL049820.1-201ENST00000442936 423 ntTSL 2 BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 AC105393.1-202ENST00000449621 598 ntTSL 3 BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 ENPP7P1-201ENST00000509557 999 ntBASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 AC008591.1-202ENST00000515569 462 ntTSL 2 BASIC8.64□□□□□ -1.03
VPS9D1Q9Y2B5 RNU6-388P-201ENST00000517012 105 ntBASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms