Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.5□□□□□ -1.21
SNED1Q8TER0 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.5□□□□□ -1.21
SNED1Q8TER0 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SNED1Q8TER0 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
SNED1Q8TER0 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.5□□□□□ -1.21
SNED1Q8TER0 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.5□□□□□ -1.21
SNED1Q8TER0 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC7.5□□□□□ -1.21
SNED1Q8TER0 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SNED1Q8TER0 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.5□□□□□ -1.21
SNED1Q8TER0 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
SNED1Q8TER0 MARK2P4-201ENST00000503381 2380 ntBASIC7.5□□□□□ -1.21
SNED1Q8TER0 CRP-204ENST00000368112 787 ntTSL 2 BASIC7.5□□□□□ -1.21
SNED1Q8TER0 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC7.5□□□□□ -1.21
SNED1Q8TER0 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.5□□□□□ -1.21
SNED1Q8TER0 AL163193.1-201ENST00000444895 788 ntBASIC7.5□□□□□ -1.21
SNED1Q8TER0 AC010343.2-201ENST00000510162 224 ntBASIC7.5□□□□□ -1.21
SNED1Q8TER0 SNORA70.20-201ENST00000516848 126 ntBASIC7.5□□□□□ -1.21
SNED1Q8TER0 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC7.5□□□□□ -1.21
SNED1Q8TER0 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC7.5□□□□□ -1.21
SNED1Q8TER0 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.5□□□□□ -1.21
SNED1Q8TER0 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.5□□□□□ -1.21
SNED1Q8TER0 AC015802.2-201ENST00000589690 189 ntBASIC7.5□□□□□ -1.21
SNED1Q8TER0 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.5□□□□□ -1.21
SNED1Q8TER0 IMMP1LP3-201ENST00000604197 224 ntBASIC7.5□□□□□ -1.21
SNED1Q8TER0 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SNED1Q8TER0 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SNED1Q8TER0 CREM-217ENST00000439705 2306 ntTSL 5 BASIC7.5□□□□□ -1.21
SNED1Q8TER0 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.5□□□□□ -1.21
SNED1Q8TER0 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
SNED1Q8TER0 AC092111.1-201ENST00000618256 3358 ntBASIC7.5□□□□□ -1.21
SNED1Q8TER0 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
SNED1Q8TER0 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.5□□□□□ -1.21
SNED1Q8TER0 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SNED1Q8TER0 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SNED1Q8TER0 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.5□□□□□ -1.21
SNED1Q8TER0 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
SNED1Q8TER0 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
SNED1Q8TER0 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SNED1Q8TER0 RPS2P45-201ENST00000469997 2057 ntBASIC7.49□□□□□ -1.21
SNED1Q8TER0 AC027279.4-201ENST00000624371 2072 ntBASIC7.49□□□□□ -1.21
SNED1Q8TER0 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.49□□□□□ -1.21
SNED1Q8TER0 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
SNED1Q8TER0 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SNED1Q8TER0 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SNED1Q8TER0 GUCY1B2-204ENST00000531898 1979 ntBASIC7.49□□□□□ -1.21
SNED1Q8TER0 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SNED1Q8TER0 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SNED1Q8TER0 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
SNED1Q8TER0 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SNED1Q8TER0 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SNED1Q8TER0 RNU6-171P-201ENST00000384354 107 ntBASIC7.49□□□□□ -1.21
SNED1Q8TER0 MIR105-2-201ENST00000385083 81 ntBASIC7.49□□□□□ -1.21
SNED1Q8TER0 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.49□□□□□ -1.21
SNED1Q8TER0 AL596448.1-201ENST00000415024 392 ntBASIC7.49□□□□□ -1.21
SNED1Q8TER0 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC7.49□□□□□ -1.21
SNED1Q8TER0 RPS7P8-201ENST00000418311 581 ntBASIC7.49□□□□□ -1.21
SNED1Q8TER0 AL355433.1-201ENST00000422804 300 ntBASIC7.49□□□□□ -1.21
SNED1Q8TER0 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.49□□□□□ -1.21
SNED1Q8TER0 AC091965.3-201ENST00000506236 208 ntBASIC7.49□□□□□ -1.21
SNED1Q8TER0 SUMO2P7-201ENST00000511179 285 ntBASIC7.49□□□□□ -1.21
SNED1Q8TER0 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC7.49□□□□□ -1.21
SNED1Q8TER0 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SNED1Q8TER0 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC7.49□□□□□ -1.21
SNED1Q8TER0 RPA2P3-201ENST00000533268 770 ntBASIC7.49□□□□□ -1.21
SNED1Q8TER0 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC7.49□□□□□ -1.21
SNED1Q8TER0 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.49□□□□□ -1.21
SNED1Q8TER0 MIR4700-201ENST00000578311 74 ntBASIC7.49□□□□□ -1.21
SNED1Q8TER0 AC004948.1-201ENST00000609858 672 ntBASIC7.49□□□□□ -1.21
SNED1Q8TER0 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
SNED1Q8TER0 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.49□□□□□ -1.21
SNED1Q8TER0 AC053481.2-202ENST00000582394 1500 ntBASIC7.49□□□□□ -1.21
SNED1Q8TER0 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SNED1Q8TER0 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SNED1Q8TER0 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SNED1Q8TER0 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC7.49□□□□□ -1.21
SNED1Q8TER0 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.49□□□□□ -1.21
SNED1Q8TER0 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.49□□□□□ -1.21
SNED1Q8TER0 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SNED1Q8TER0 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
SNED1Q8TER0 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SNED1Q8TER0 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SNED1Q8TER0 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.49□□□□□ -1.21
SNED1Q8TER0 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC7.48□□□□□ -1.21
SNED1Q8TER0 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
SNED1Q8TER0 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
SNED1Q8TER0 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
SNED1Q8TER0 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SNED1Q8TER0 LPP-208ENST00000448637 5835 ntTSL 5 BASIC7.48□□□□□ -1.21
SNED1Q8TER0 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.48□□□□□ -1.21
SNED1Q8TER0 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.48□□□□□ -1.21
SNED1Q8TER0 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.48□□□□□ -1.21
SNED1Q8TER0 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SNED1Q8TER0 AL161901.1-201ENST00000624954 3425 ntBASIC7.48□□□□□ -1.21
SNED1Q8TER0 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SNED1Q8TER0 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SNED1Q8TER0 RN7SKP162-201ENST00000363605 345 ntBASIC7.48□□□□□ -1.21
SNED1Q8TER0 RN7SKP161-201ENST00000411110 305 ntBASIC7.48□□□□□ -1.21
SNED1Q8TER0 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SNED1Q8TER0 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC7.48□□□□□ -1.21
SNED1Q8TER0 RPS23P6-201ENST00000466136 431 ntBASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms