Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 LRRC37A9P-201ENST00000603850 5376 ntBASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 HSPD1P1-201ENST00000503199 1726 ntBASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 MIR16-2-201ENST00000362117 81 ntBASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 RN7SKP118-201ENST00000364331 330 ntBASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 MIR187-201ENST00000385062 109 ntBASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 RNU4-27P-201ENST00000410889 139 ntBASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 RNU4-22P-201ENST00000411058 166 ntBASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 AL008987.1-201ENST00000415528 237 ntBASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 AL589794.1-201ENST00000424971 390 ntBASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 FO393414.1-201ENST00000428697 1184 ntBASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 AC013403.1-201ENST00000436954 263 ntBASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 AC073052.1-201ENST00000440417 714 ntBASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 AC006326.1-201ENST00000445465 787 ntBASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 HMGB1P26-201ENST00000452520 628 ntBASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 RPL21P18-201ENST00000469899 480 ntBASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 RN7SL751P-201ENST00000473281 284 ntBASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 AC091982.1-202ENST00000473923 343 ntBASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 NPM1P29-201ENST00000483112 803 ntBASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 AC109464.2-201ENST00000510242 943 ntBASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 AC131935.1-201ENST00000524621 333 ntBASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 C1GALT1P1-201ENST00000548895 1089 ntBASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 AP002884.5-201ENST00000595053 1132 ntBASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 AC073387.2-201ENST00000604797 784 ntBASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 AC007038.2-201ENST00000608095 740 ntBASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 AL121583.1-201ENST00000612444 682 ntBASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 AL590240.3-201ENST00000621416 943 ntBASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 AC010435.1-201ENST00000623353 1177 ntBASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 OR11H2-202ENST00000641517 1085 ntBASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 OR8A1-204ENST00000642111 1145 ntBASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 ALB-220ENST00000621628 1606 ntTSL 5 BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
SHKBP1Q8TBC3 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 RNU5B-4P-201ENST00000363508 111 ntBASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 RNU4-68P-201ENST00000364314 141 ntBASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 MTCO1P17-201ENST00000411522 491 ntBASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC7.55□□□□□ -1.2
SHKBP1Q8TBC3 UBE2V1P9-201ENST00000414760 368 ntBASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms