Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC3.21□□□□□ -1.9
HMCN2Q8NDA2 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HMCN2Q8NDA2 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.21□□□□□ -1.9
HMCN2Q8NDA2 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC3.21□□□□□ -1.9
HMCN2Q8NDA2 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.21□□□□□ -1.9
HMCN2Q8NDA2 AC079414.3-201ENST00000612986 1090 ntBASIC3.21□□□□□ -1.9
HMCN2Q8NDA2 AC112694.2-201ENST00000623697 768 ntBASIC3.21□□□□□ -1.9
HMCN2Q8NDA2 AL512310.3-201ENST00000547023 1335 ntBASIC3.21□□□□□ -1.9
HMCN2Q8NDA2 CASC19-221ENST00000641309 1382 ntBASIC3.21□□□□□ -1.9
HMCN2Q8NDA2 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
HMCN2Q8NDA2 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
HMCN2Q8NDA2 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
HMCN2Q8NDA2 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HMCN2Q8NDA2 NUP214-203ENST00000451030 5021 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HMCN2Q8NDA2 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 RNU6-761P-201ENST00000384148 107 ntBASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 RNU1-46P-201ENST00000384425 164 ntBASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 RNU1-77P-201ENST00000390868 162 ntBASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 AC006946.1-201ENST00000429106 328 ntBASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 AL139156.3-201ENST00000454802 394 ntBASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 AC021006.3-201ENST00000530771 192 ntBASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 AC009120.3-201ENST00000563335 499 ntBASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 MIR6716-201ENST00000613413 80 ntBASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 WBP1LP8-201ENST00000617401 327 ntBASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 MYH10-203ENST00000379980 7694 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 DDX3X-217ENST00000629496 5023 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 COL28A1-201ENST00000399429 4277 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 AC069307.1-201ENST00000602820 447 ntBASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 WWOX-217ENST00000620008 450 ntTSL 2 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 AC091905.4-201ENST00000623432 202 ntBASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 ZNF91-201ENST00000300619 5489 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 MAN2A2-201ENST00000360468 6268 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 RNU4-39P-201ENST00000362455 127 ntBASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 AC091390.3-201ENST00000426478 338 ntBASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 RPL12P28-201ENST00000430852 489 ntBASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 RPL5P25-201ENST00000441148 775 ntBASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 AC114728.1-201ENST00000488289 483 ntBASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 AL035690.1-201ENST00000490892 383 ntBASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 AC083829.1-201ENST00000503756 657 ntBASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 AL031320.1-201ENST00000604177 357 ntBASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 ZNF441-201ENST00000357901 4356 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 ZMYND8-204ENST00000355972 5542 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 OR10R3P-201ENST00000361688 942 ntBASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 NPM1P33-201ENST00000438918 872 ntBASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 CUBNP2-201ENST00000443534 1139 ntBASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 AL358232.1-201ENST00000448030 501 ntBASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 RPS27AP3-201ENST00000453803 454 ntBASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 RPL23AP72-201ENST00000492447 435 ntBASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 ABCA11P-202ENST00000504019 2110 ntBASIC3.2□□□□□ -1.9
HMCN2Q8NDA2 AC084824.1-201ENST00000550917 1005 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms