Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 AC007938.1-201ENST00000562524 2902 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 CDC25C-201ENST00000323760 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 CYCS-201ENST00000305786 4098 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 SNORA72.1-201ENST00000363485 129 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 Y_RNA.256-201ENST00000364594 104 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 RNU6-98P-201ENST00000384173 107 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 RNU6-1300P-201ENST00000391046 108 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 SNORD115-47-201ENST00000391226 86 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 RN7SKP154-201ENST00000410136 290 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 RN7SKP161-201ENST00000411110 305 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 AC009228.1-201ENST00000413254 240 ntTSL 2 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 VN1R20P-201ENST00000425215 966 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 TRIM60P10Y-201ENST00000425589 751 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 RPSAP10-201ENST00000426103 878 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 AL683807.1-201ENST00000427886 445 ntTSL 2 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 MYL6BP1-201ENST00000429485 615 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 LINC01865-201ENST00000430529 845 ntTSL 3 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 TRIM60P8Y-201ENST00000436338 762 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 HMGB1P31-201ENST00000437242 427 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 PPIAP17-201ENST00000438507 471 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 COX6CP18-201ENST00000448769 222 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 AC104843.1-201ENST00000451203 319 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 SNORD42A-201ENST00000459584 64 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 RN7SL706P-201ENST00000460079 292 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 RN7SL757P-201ENST00000466709 301 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 AC007547.2-201ENST00000468802 360 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 RN7SL156P-201ENST00000480334 304 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 RPL5P29-201ENST00000482972 894 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 RPL7P38-201ENST00000488396 739 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 AC018639.1-201ENST00000492994 442 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 FAM92A1P2-202ENST00000504766 877 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 RPL10P9-201ENST00000522551 645 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 AL110292.1-202ENST00000552303 568 ntTSL 4 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 AC006960.3-201ENST00000561845 705 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 AC010536.2-201ENST00000563036 338 ntTSL 3 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 AL049634.2-203ENST00000564763 588 ntAPPRIS ALT2 TSL 4 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 LINC01834-201ENST00000567374 385 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 FRG2JP-201ENST00000568299 832 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 FGF7P1-201ENST00000582820 288 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 AC004477.2-201ENST00000583349 192 ntTSL 3 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 AC006504.3-201ENST00000586818 523 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 AC087289.3-203ENST00000587556 550 ntAPPRIS P5 TSL 4 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 AC008751.1-201ENST00000600438 342 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 SEPT7P9-203ENST00000604116 343 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 AC006338.1-201ENST00000618453 749 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 AC119619.1-201ENST00000619728 112 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 Metazoa_SRP.20-201ENST00000619896 275 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 CU639417.5-201ENST00000623983 476 ntTSL 3 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 OR52B5P-202ENST00000641118 1110 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 NACA-216ENST00000550952 2922 ntTSL 2 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 PPP3CA-205ENST00000507176 1958 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 FHL1-230ENST00000630084 1335 ntTSL 2 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 MAPK10-290ENST00000641237 2826 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 CASC19-205ENST00000641013 1411 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 ZMIZ1-AS1-201ENST00000428862 2851 ntTSL 5 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 RAB5B-210ENST00000553116 3322 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 PLCE1-AS1-203ENST00000596633 1683 ntTSL 3 BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
DEPDC4Q8N2C3 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms