Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
XRN1Q8IZH2 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
XRN1Q8IZH2 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
XRN1Q8IZH2 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC8.41□□□□□ -1.06
XRN1Q8IZH2 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
XRN1Q8IZH2 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
XRN1Q8IZH2 SALL4P7-201ENST00000555779 3120 ntBASIC8.4□□□□□ -1.06
XRN1Q8IZH2 AC012075.1-201ENST00000436549 580 ntBASIC8.4□□□□□ -1.06
XRN1Q8IZH2 Z84478.1-201ENST00000438230 1219 ntBASIC8.4□□□□□ -1.06
XRN1Q8IZH2 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
XRN1Q8IZH2 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC8.4□□□□□ -1.06
XRN1Q8IZH2 AC008953.1-201ENST00000497334 318 ntBASIC8.4□□□□□ -1.06
XRN1Q8IZH2 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC8.4□□□□□ -1.06
XRN1Q8IZH2 AC008629.2-201ENST00000503783 483 ntBASIC8.4□□□□□ -1.06
XRN1Q8IZH2 RNA5SP400-201ENST00000517155 111 ntBASIC8.4□□□□□ -1.06
XRN1Q8IZH2 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC8.4□□□□□ -1.06
XRN1Q8IZH2 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC8.4□□□□□ -1.06
XRN1Q8IZH2 AL049840.6-201ENST00000604583 345 ntBASIC8.4□□□□□ -1.06
XRN1Q8IZH2 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC8.4□□□□□ -1.06
XRN1Q8IZH2 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
XRN1Q8IZH2 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
XRN1Q8IZH2 AL049634.1-201ENST00000453770 1720 ntBASIC8.4□□□□□ -1.06
XRN1Q8IZH2 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
XRN1Q8IZH2 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
XRN1Q8IZH2 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC8.4□□□□□ -1.06
XRN1Q8IZH2 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
XRN1Q8IZH2 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
XRN1Q8IZH2 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC8.4□□□□□ -1.06
XRN1Q8IZH2 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
XRN1Q8IZH2 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
XRN1Q8IZH2 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
XRN1Q8IZH2 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
XRN1Q8IZH2 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
XRN1Q8IZH2 SNORA70-201ENST00000384436 135 ntBASIC8.4□□□□□ -1.07
XRN1Q8IZH2 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC8.4□□□□□ -1.07
XRN1Q8IZH2 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC8.4□□□□□ -1.07
XRN1Q8IZH2 AC005532.2-201ENST00000467154 373 ntBASIC8.4□□□□□ -1.07
XRN1Q8IZH2 RN7SL57P-201ENST00000493687 290 ntBASIC8.4□□□□□ -1.07
XRN1Q8IZH2 GAPDHP71-201ENST00000511530 1003 ntBASIC8.4□□□□□ -1.07
XRN1Q8IZH2 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC8.4□□□□□ -1.07
XRN1Q8IZH2 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC8.4□□□□□ -1.07
XRN1Q8IZH2 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC8.4□□□□□ -1.07
XRN1Q8IZH2 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC8.4□□□□□ -1.07
XRN1Q8IZH2 AC105235.1-201ENST00000623208 1816 ntBASIC8.4□□□□□ -1.07
XRN1Q8IZH2 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
XRN1Q8IZH2 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
XRN1Q8IZH2 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC8.39□□□□□ -1.07
XRN1Q8IZH2 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC8.39□□□□□ -1.07
XRN1Q8IZH2 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
XRN1Q8IZH2 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
XRN1Q8IZH2 LINC02019-201ENST00000608605 2060 ntBASIC8.39□□□□□ -1.07
XRN1Q8IZH2 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
XRN1Q8IZH2 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
XRN1Q8IZH2 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
XRN1Q8IZH2 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
XRN1Q8IZH2 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
XRN1Q8IZH2 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC8.39□□□□□ -1.07
XRN1Q8IZH2 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
XRN1Q8IZH2 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
XRN1Q8IZH2 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
XRN1Q8IZH2 OR6E1P-201ENST00000414424 923 ntBASIC8.39□□□□□ -1.07
XRN1Q8IZH2 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC8.39□□□□□ -1.07
XRN1Q8IZH2 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC8.39□□□□□ -1.07
XRN1Q8IZH2 AL390119.1-201ENST00000440329 312 ntBASIC8.39□□□□□ -1.07
XRN1Q8IZH2 SPRYD7P1-201ENST00000443861 570 ntBASIC8.39□□□□□ -1.07
XRN1Q8IZH2 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC8.39□□□□□ -1.07
XRN1Q8IZH2 OTX2P1-201ENST00000450956 354 ntBASIC8.39□□□□□ -1.07
XRN1Q8IZH2 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC8.39□□□□□ -1.07
XRN1Q8IZH2 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC8.39□□□□□ -1.07
XRN1Q8IZH2 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC8.39□□□□□ -1.07
XRN1Q8IZH2 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC8.39□□□□□ -1.07
XRN1Q8IZH2 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC8.39□□□□□ -1.07
XRN1Q8IZH2 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC8.39□□□□□ -1.07
XRN1Q8IZH2 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
XRN1Q8IZH2 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
XRN1Q8IZH2 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
XRN1Q8IZH2 AC089998.1-201ENST00000548575 3141 ntBASIC8.39□□□□□ -1.07
XRN1Q8IZH2 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
XRN1Q8IZH2 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC8.39□□□□□ -1.07
XRN1Q8IZH2 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
XRN1Q8IZH2 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC8.38□□□□□ -1.07
XRN1Q8IZH2 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
XRN1Q8IZH2 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
XRN1Q8IZH2 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
XRN1Q8IZH2 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
XRN1Q8IZH2 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
XRN1Q8IZH2 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
XRN1Q8IZH2 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC8.38□□□□□ -1.07
XRN1Q8IZH2 RN7SKP216-201ENST00000411050 312 ntBASIC8.38□□□□□ -1.07
XRN1Q8IZH2 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC8.38□□□□□ -1.07
XRN1Q8IZH2 CNOT7P2-201ENST00000441051 832 ntBASIC8.38□□□□□ -1.07
XRN1Q8IZH2 IGKV1OR10-1-201ENST00000442306 329 ntBASIC8.38□□□□□ -1.07
XRN1Q8IZH2 RPS7P3-201ENST00000443360 580 ntBASIC8.38□□□□□ -1.07
XRN1Q8IZH2 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC8.38□□□□□ -1.07
XRN1Q8IZH2 IGKV1OR22-5-201ENST00000458718 354 ntBASIC8.38□□□□□ -1.07
XRN1Q8IZH2 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC8.38□□□□□ -1.07
XRN1Q8IZH2 RNU4ATAC-201ENST00000580972 127 ntBASIC8.38□□□□□ -1.07
XRN1Q8IZH2 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
XRN1Q8IZH2 AC087269.2-201ENST00000641764 975 ntBASIC8.38□□□□□ -1.07
XRN1Q8IZH2 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms