Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CTR9Q6PD62 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.55□□□□□ -1.2
CTR9Q6PD62 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CTR9Q6PD62 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CTR9Q6PD62 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CTR9Q6PD62 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
CTR9Q6PD62 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
CTR9Q6PD62 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CTR9Q6PD62 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC7.55□□□□□ -1.2
CTR9Q6PD62 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.55□□□□□ -1.2
CTR9Q6PD62 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CTR9Q6PD62 OR11H13P-201ENST00000359695 979 ntBASIC7.55□□□□□ -1.2
CTR9Q6PD62 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC7.55□□□□□ -1.2
CTR9Q6PD62 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CTR9Q6PD62 RNA5SP431-201ENST00000410312 120 ntBASIC7.55□□□□□ -1.2
CTR9Q6PD62 AC092865.3-201ENST00000425390 1026 ntBASIC7.55□□□□□ -1.2
CTR9Q6PD62 RPSAP65-201ENST00000429660 595 ntBASIC7.55□□□□□ -1.2
CTR9Q6PD62 SOCS5P1-201ENST00000440415 949 ntBASIC7.55□□□□□ -1.2
CTR9Q6PD62 RPSAP40-201ENST00000442343 891 ntBASIC7.55□□□□□ -1.2
CTR9Q6PD62 REG1CP-206ENST00000447469 496 ntBASIC7.55□□□□□ -1.2
CTR9Q6PD62 OR4D12P-201ENST00000509361 911 ntBASIC7.55□□□□□ -1.2
CTR9Q6PD62 SNX18P25-201ENST00000510539 758 ntBASIC7.55□□□□□ -1.2
CTR9Q6PD62 KHDC1P1-201ENST00000511053 508 ntBASIC7.55□□□□□ -1.2
CTR9Q6PD62 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC7.55□□□□□ -1.2
CTR9Q6PD62 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CTR9Q6PD62 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CTR9Q6PD62 APOC2-205ENST00000592257 444 ntTSL 3 BASIC7.55□□□□□ -1.2
CTR9Q6PD62 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC7.55□□□□□ -1.2
CTR9Q6PD62 AC124916.2-201ENST00000604416 224 ntBASIC7.55□□□□□ -1.2
CTR9Q6PD62 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.55□□□□□ -1.2
CTR9Q6PD62 AC073593.1-201ENST00000624500 411 ntBASIC7.55□□□□□ -1.2
CTR9Q6PD62 AL132640.3-201ENST00000630473 177 ntBASIC7.55□□□□□ -1.2
CTR9Q6PD62 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
CTR9Q6PD62 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CTR9Q6PD62 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CTR9Q6PD62 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.55□□□□□ -1.2
CTR9Q6PD62 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
CTR9Q6PD62 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CTR9Q6PD62 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CTR9Q6PD62 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CTR9Q6PD62 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC7.54□□□□□ -1.2
CTR9Q6PD62 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
CTR9Q6PD62 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CTR9Q6PD62 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CTR9Q6PD62 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.54□□□□□ -1.2
CTR9Q6PD62 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CTR9Q6PD62 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.54□□□□□ -1.2
CTR9Q6PD62 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.54□□□□□ -1.2
CTR9Q6PD62 VN1R12P-201ENST00000403778 876 ntBASIC7.54□□□□□ -1.2
CTR9Q6PD62 SNORA11.5-201ENST00000408163 128 ntBASIC7.54□□□□□ -1.2
CTR9Q6PD62 U3.43-201ENST00000410734 213 ntBASIC7.54□□□□□ -1.2
CTR9Q6PD62 AK3P5-201ENST00000432033 519 ntBASIC7.54□□□□□ -1.2
CTR9Q6PD62 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.54□□□□□ -1.2
CTR9Q6PD62 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
CTR9Q6PD62 AL133351.3-201ENST00000454998 193 ntBASIC7.54□□□□□ -1.2
CTR9Q6PD62 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.54□□□□□ -1.2
CTR9Q6PD62 RN7SL714P-201ENST00000487050 298 ntBASIC7.54□□□□□ -1.2
CTR9Q6PD62 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC7.54□□□□□ -1.2
CTR9Q6PD62 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC7.54□□□□□ -1.2
CTR9Q6PD62 AC026826.3-201ENST00000561747 158 ntBASIC7.54□□□□□ -1.2
CTR9Q6PD62 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.54□□□□□ -1.2
CTR9Q6PD62 AC134669.1-201ENST00000581275 672 ntBASIC7.54□□□□□ -1.2
CTR9Q6PD62 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.54□□□□□ -1.2
CTR9Q6PD62 SNORA74.4-201ENST00000607595 199 ntBASIC7.54□□□□□ -1.2
CTR9Q6PD62 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC7.54□□□□□ -1.2
CTR9Q6PD62 AP001153.1-201ENST00000641024 338 ntBASIC7.54□□□□□ -1.2
CTR9Q6PD62 OFD1P15Y-201ENST00000411536 1392 ntBASIC7.54□□□□□ -1.2
CTR9Q6PD62 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
CTR9Q6PD62 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CTR9Q6PD62 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CTR9Q6PD62 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CTR9Q6PD62 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CTR9Q6PD62 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CTR9Q6PD62 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.53□□□□□ -1.2
CTR9Q6PD62 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CTR9Q6PD62 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CTR9Q6PD62 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CTR9Q6PD62 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CTR9Q6PD62 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CTR9Q6PD62 AL133243.2-201ENST00000610331 1621 ntBASIC7.53□□□□□ -1.2
CTR9Q6PD62 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CTR9Q6PD62 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7.53□□□□□ -1.2
CTR9Q6PD62 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CTR9Q6PD62 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CTR9Q6PD62 RN7SKP237-201ENST00000364663 301 ntBASIC7.53□□□□□ -1.2
CTR9Q6PD62 GCNT1P4-201ENST00000404096 329 ntBASIC7.53□□□□□ -1.2
CTR9Q6PD62 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC7.53□□□□□ -1.2
CTR9Q6PD62 AC117394.1-201ENST00000477323 567 ntBASIC7.53□□□□□ -1.2
CTR9Q6PD62 AC095052.1-201ENST00000509955 863 ntBASIC7.53□□□□□ -1.2
CTR9Q6PD62 AC106800.3-201ENST00000511389 308 ntBASIC7.53□□□□□ -1.2
CTR9Q6PD62 AC011853.1-201ENST00000518911 454 ntBASIC7.53□□□□□ -1.2
CTR9Q6PD62 NPIPB14P-203ENST00000532298 987 ntBASIC7.53□□□□□ -1.2
CTR9Q6PD62 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC7.53□□□□□ -1.2
CTR9Q6PD62 AL845552.1-201ENST00000556820 323 ntBASIC7.53□□□□□ -1.2
CTR9Q6PD62 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.53□□□□□ -1.2
CTR9Q6PD62 MIR4502-201ENST00000580432 81 ntBASIC7.53□□□□□ -1.2
CTR9Q6PD62 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC7.53□□□□□ -1.2
CTR9Q6PD62 AL080312.2-201ENST00000613001 630 ntBASIC7.53□□□□□ -1.2
CTR9Q6PD62 AC018659.2-201ENST00000624690 715 ntBASIC7.53□□□□□ -1.2
CTR9Q6PD62 AC073488.6-201ENST00000632293 754 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms