Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AL596275.2-208ENST00000641192 594 ntBASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 AC217777.1-201ENST00000570034 1471 ntBASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC144BQ3MJ40 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 OR52B5P-204ENST00000641744 3467 ntBASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 AC132825.1-201ENST00000463573 2247 ntBASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 GMFG-201ENST00000253054 616 ntTSL 5 BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 RNU6-1017P-201ENST00000363613 106 ntBASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 AC019178.1-201ENST00000392337 440 ntBASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 FDPSP5-201ENST00000399474 1057 ntBASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 VN1R37P-201ENST00000419096 748 ntBASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 ARL2BPP3-201ENST00000421226 480 ntBASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 AL139184.1-202ENST00000422303 222 ntBASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 AL034379.1-201ENST00000423216 253 ntBASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 LSM3P3-201ENST00000436601 306 ntBASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 AC245291.3-201ENST00000443400 292 ntBASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 AC135721.2-201ENST00000464237 300 ntBASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 AP005202.1-201ENST00000489915 867 ntBASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 RNU6-334P-201ENST00000517072 102 ntBASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 AC007537.1-201ENST00000539347 327 ntBASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 AC068880.4-201ENST00000623082 495 ntBASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 AC005514.1-201ENST00000623521 208 ntBASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 AC068213.1-201ENST00000625124 226 ntBASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 AL359715.3-201ENST00000569267 2123 ntBASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC144BQ3MJ40 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 AC010132.4-201ENST00000569883 1368 ntBASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 AC022905.1-201ENST00000503430 3048 ntBASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 AC116158.1-201ENST00000560231 2129 ntBASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 TPTE2P2-201ENST00000403471 1466 ntBASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 OR4K17-201ENST00000315543 1032 ntBASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 SNORA64.3-201ENST00000365647 134 ntBASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 RSL24D1P1-201ENST00000404972 493 ntBASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.84□□□□□ -1.15
CCDC144BQ3MJ40 RN7SKP188-201ENST00000410789 317 ntBASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms