Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SMARCA2P51531 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SMARCA2P51531 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
SMARCA2P51531 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC10.79□□□□□ -0.68
SMARCA2P51531 AC012075.1-201ENST00000436549 580 ntBASIC10.79□□□□□ -0.68
SMARCA2P51531 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC10.79□□□□□ -0.68
SMARCA2P51531 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC10.79□□□□□ -0.68
SMARCA2P51531 AC095057.1-201ENST00000507583 168 ntBASIC10.79□□□□□ -0.68
SMARCA2P51531 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC10.79□□□□□ -0.68
SMARCA2P51531 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC10.79□□□□□ -0.68
SMARCA2P51531 IGBP1P1-201ENST00000554337 1009 ntBASIC10.79□□□□□ -0.68
SMARCA2P51531 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC10.79□□□□□ -0.68
SMARCA2P51531 AP002884.5-201ENST00000595053 1132 ntBASIC10.79□□□□□ -0.68
SMARCA2P51531 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SMARCA2P51531 MYPN-205ENST00000613327 6116 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SMARCA2P51531 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SMARCA2P51531 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SMARCA2P51531 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC10.79□□□□□ -0.68
SMARCA2P51531 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
SMARCA2P51531 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SMARCA2P51531 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
SMARCA2P51531 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SMARCA2P51531 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SMARCA2P51531 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SMARCA2P51531 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SMARCA2P51531 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
SMARCA2P51531 GAPDHP24-201ENST00000328713 983 ntBASIC10.78□□□□□ -0.68
SMARCA2P51531 CCNB1IP1P1-201ENST00000428976 839 ntBASIC10.78□□□□□ -0.68
SMARCA2P51531 AL445928.1-201ENST00000435545 222 ntBASIC10.78□□□□□ -0.68
SMARCA2P51531 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC10.78□□□□□ -0.68
SMARCA2P51531 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC10.78□□□□□ -0.68
SMARCA2P51531 MGAT2P1-201ENST00000449718 797 ntBASIC10.78□□□□□ -0.68
SMARCA2P51531 AC108161.1-201ENST00000461060 402 ntBASIC10.78□□□□□ -0.68
SMARCA2P51531 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC10.78□□□□□ -0.68
SMARCA2P51531 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC10.78□□□□□ -0.68
SMARCA2P51531 MINCR-206ENST00000524335 499 ntTSL 2 BASIC10.78□□□□□ -0.68
SMARCA2P51531 AL137246.2-201ENST00000613439 662 ntBASIC10.78□□□□□ -0.68
SMARCA2P51531 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC10.78□□□□□ -0.68
SMARCA2P51531 BIN2P1-201ENST00000504996 1530 ntBASIC10.78□□□□□ -0.68
SMARCA2P51531 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC10.78□□□□□ -0.68
SMARCA2P51531 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SMARCA2P51531 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC10.78□□□□□ -0.68
SMARCA2P51531 LINC02019-201ENST00000608605 2060 ntBASIC10.78□□□□□ -0.68
SMARCA2P51531 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC10.78□□□□□ -0.68
SMARCA2P51531 SALL4P7-201ENST00000555779 3120 ntBASIC10.78□□□□□ -0.68
SMARCA2P51531 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SMARCA2P51531 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SMARCA2P51531 AC115223.1-201ENST00000466377 870 ntBASIC10.77□□□□□ -0.68
SMARCA2P51531 RPS3AP15-201ENST00000483874 781 ntBASIC10.77□□□□□ -0.68
SMARCA2P51531 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC10.77□□□□□ -0.68
SMARCA2P51531 OR8G3P-201ENST00000533406 921 ntBASIC10.77□□□□□ -0.68
SMARCA2P51531 HAUS8P1-201ENST00000549005 542 ntBASIC10.77□□□□□ -0.68
SMARCA2P51531 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SMARCA2P51531 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC10.77□□□□□ -0.68
SMARCA2P51531 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SMARCA2P51531 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SMARCA2P51531 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
SMARCA2P51531 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC10.77□□□□□ -0.69
SMARCA2P51531 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
SMARCA2P51531 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC10.77□□□□□ -0.69
SMARCA2P51531 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SMARCA2P51531 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC10.77□□□□□ -0.69
SMARCA2P51531 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
SMARCA2P51531 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SMARCA2P51531 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SMARCA2P51531 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC10.77□□□□□ -0.69
SMARCA2P51531 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC10.77□□□□□ -0.69
SMARCA2P51531 AC009784.1-201ENST00000426484 460 ntBASIC10.77□□□□□ -0.69
SMARCA2P51531 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC10.77□□□□□ -0.69
SMARCA2P51531 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC10.77□□□□□ -0.69
SMARCA2P51531 CBX1P2-201ENST00000453841 458 ntBASIC10.77□□□□□ -0.69
SMARCA2P51531 RPL35AP28-201ENST00000459730 331 ntBASIC10.77□□□□□ -0.69
SMARCA2P51531 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC10.77□□□□□ -0.69
SMARCA2P51531 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC10.77□□□□□ -0.69
SMARCA2P51531 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC10.77□□□□□ -0.69
SMARCA2P51531 LDHC-203ENST00000535809 757 ntTSL 5 BASIC10.77□□□□□ -0.69
SMARCA2P51531 LDHC-205ENST00000537486 583 ntTSL 5 BASIC10.77□□□□□ -0.69
SMARCA2P51531 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC10.77□□□□□ -0.69
SMARCA2P51531 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC10.77□□□□□ -0.69
SMARCA2P51531 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SMARCA2P51531 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC10.77□□□□□ -0.69
SMARCA2P51531 ELOCP28-201ENST00000590044 317 ntBASIC10.77□□□□□ -0.69
SMARCA2P51531 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
SMARCA2P51531 AC139493.1-201ENST00000604368 397 ntBASIC10.77□□□□□ -0.69
SMARCA2P51531 AC097467.4-201ENST00000605504 141 ntBASIC10.77□□□□□ -0.69
SMARCA2P51531 AC008115.4-201ENST00000619780 775 ntBASIC10.77□□□□□ -0.69
SMARCA2P51531 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SMARCA2P51531 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC10.76□□□□□ -0.69
SMARCA2P51531 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
SMARCA2P51531 ERG-205ENST00000398910 4954 ntTSL 5 BASIC10.76□□□□□ -0.69
SMARCA2P51531 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
SMARCA2P51531 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SMARCA2P51531 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SMARCA2P51531 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
SMARCA2P51531 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
SMARCA2P51531 AL133270.1-201ENST00000402635 279 ntBASIC10.76□□□□□ -0.69
SMARCA2P51531 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC10.76□□□□□ -0.69
SMARCA2P51531 AC113412.1-201ENST00000425840 504 ntBASIC10.76□□□□□ -0.69
SMARCA2P51531 AL022331.1-201ENST00000429025 477 ntBASIC10.76□□□□□ -0.69
SMARCA2P51531 FABP7P2-201ENST00000429946 379 ntBASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms