Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
COL15A1P39059 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL15A1P39059 RAD17P2-201ENST00000451754 1977 ntBASIC7.93□□□□□ -1.14
COL15A1P39059 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL15A1P39059 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
COL15A1P39059 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.93□□□□□ -1.14
COL15A1P39059 AL591848.4-201ENST00000567832 3472 ntBASIC7.93□□□□□ -1.14
COL15A1P39059 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
COL15A1P39059 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
COL15A1P39059 AC105235.1-201ENST00000623208 1816 ntBASIC7.93□□□□□ -1.14
COL15A1P39059 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL15A1P39059 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL15A1P39059 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL15A1P39059 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL15A1P39059 U3.25-201ENST00000391209 220 ntBASIC7.93□□□□□ -1.14
COL15A1P39059 AC097721.1-201ENST00000427150 1253 ntBASIC7.93□□□□□ -1.14
COL15A1P39059 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.93□□□□□ -1.14
COL15A1P39059 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC7.93□□□□□ -1.14
COL15A1P39059 AC110749.1-201ENST00000462007 357 ntBASIC7.93□□□□□ -1.14
COL15A1P39059 AC074386.1-201ENST00000476560 767 ntBASIC7.93□□□□□ -1.14
COL15A1P39059 RN7SL717P-201ENST00000478343 297 ntBASIC7.93□□□□□ -1.14
COL15A1P39059 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC7.93□□□□□ -1.14
COL15A1P39059 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC7.93□□□□□ -1.14
COL15A1P39059 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.93□□□□□ -1.14
COL15A1P39059 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.93□□□□□ -1.14
COL15A1P39059 AP005119.1-201ENST00000580956 292 ntBASIC7.93□□□□□ -1.14
COL15A1P39059 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC7.93□□□□□ -1.14
COL15A1P39059 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL15A1P39059 MIR6809-201ENST00000612189 116 ntBASIC7.93□□□□□ -1.14
COL15A1P39059 AL136228.1-201ENST00000622221 319 ntBASIC7.93□□□□□ -1.14
COL15A1P39059 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.93□□□□□ -1.14
COL15A1P39059 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.93□□□□□ -1.14
COL15A1P39059 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL15A1P39059 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
COL15A1P39059 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC7.93□□□□□ -1.14
COL15A1P39059 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
COL15A1P39059 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
COL15A1P39059 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL15A1P39059 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.92□□□□□ -1.14
COL15A1P39059 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
COL15A1P39059 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
COL15A1P39059 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
COL15A1P39059 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
COL15A1P39059 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL15A1P39059 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL15A1P39059 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL15A1P39059 RARSP1-201ENST00000542842 1418 ntBASIC7.92□□□□□ -1.14
COL15A1P39059 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
COL15A1P39059 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL15A1P39059 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL15A1P39059 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
COL15A1P39059 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL15A1P39059 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL15A1P39059 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL15A1P39059 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL15A1P39059 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL15A1P39059 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL15A1P39059 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
COL15A1P39059 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
COL15A1P39059 MIR1203-201ENST00000408812 85 ntBASIC7.92□□□□□ -1.14
COL15A1P39059 RNA5SP156-201ENST00000410250 110 ntBASIC7.92□□□□□ -1.14
COL15A1P39059 AC068138.1-201ENST00000412635 217 ntBASIC7.92□□□□□ -1.14
COL15A1P39059 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC7.92□□□□□ -1.14
COL15A1P39059 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.92□□□□□ -1.14
COL15A1P39059 AL355355.1-201ENST00000442900 793 ntBASIC7.92□□□□□ -1.14
COL15A1P39059 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
COL15A1P39059 Y_RNA.710-201ENST00000516975 110 ntBASIC7.92□□□□□ -1.14
COL15A1P39059 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC7.92□□□□□ -1.14
COL15A1P39059 AP004607.6-201ENST00000525033 1202 ntBASIC7.92□□□□□ -1.14
COL15A1P39059 EIF4EP5-201ENST00000528228 640 ntBASIC7.92□□□□□ -1.14
COL15A1P39059 AC073916.1-201ENST00000545095 130 ntBASIC7.92□□□□□ -1.14
COL15A1P39059 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC7.92□□□□□ -1.14
COL15A1P39059 NPM1P45-201ENST00000583151 559 ntBASIC7.92□□□□□ -1.14
COL15A1P39059 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.92□□□□□ -1.14
COL15A1P39059 MRO-208ENST00000588444 866 ntTSL 3 BASIC7.92□□□□□ -1.14
COL15A1P39059 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC7.92□□□□□ -1.14
COL15A1P39059 AC022467.1-201ENST00000614738 749 ntBASIC7.92□□□□□ -1.14
COL15A1P39059 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.92□□□□□ -1.14
COL15A1P39059 AL445649.1-201ENST00000615941 691 ntBASIC7.92□□□□□ -1.14
COL15A1P39059 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC7.92□□□□□ -1.14
COL15A1P39059 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.92□□□□□ -1.14
COL15A1P39059 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.92□□□□□ -1.14
COL15A1P39059 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
COL15A1P39059 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.92□□□□□ -1.14
COL15A1P39059 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
COL15A1P39059 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL15A1P39059 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL15A1P39059 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
COL15A1P39059 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL15A1P39059 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL15A1P39059 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.92□□□□□ -1.14
COL15A1P39059 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
COL15A1P39059 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC7.91□□□□□ -1.14
COL15A1P39059 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.91□□□□□ -1.14
COL15A1P39059 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
COL15A1P39059 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
COL15A1P39059 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
COL15A1P39059 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
COL15A1P39059 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.91□□□□□ -1.14
COL15A1P39059 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms