Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.28□□□□□ -1.4
RPA3P35244 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RPA3P35244 RNA5SP85-201ENST00000365378 119 ntBASIC6.28□□□□□ -1.4
RPA3P35244 RNU1-84P-201ENST00000365447 164 ntBASIC6.28□□□□□ -1.4
RPA3P35244 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC6.28□□□□□ -1.4
RPA3P35244 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RPA3P35244 AL354707.3-201ENST00000427308 331 ntBASIC6.28□□□□□ -1.4
RPA3P35244 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.28□□□□□ -1.4
RPA3P35244 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.28□□□□□ -1.4
RPA3P35244 SNRPCP11-201ENST00000492453 205 ntBASIC6.28□□□□□ -1.4
RPA3P35244 AC093664.1-201ENST00000511779 289 ntBASIC6.28□□□□□ -1.4
RPA3P35244 SNORA81.2-201ENST00000516868 170 ntBASIC6.28□□□□□ -1.4
RPA3P35244 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.28□□□□□ -1.4
RPA3P35244 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.28□□□□□ -1.4
RPA3P35244 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.28□□□□□ -1.4
RPA3P35244 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.28□□□□□ -1.4
RPA3P35244 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.28□□□□□ -1.4
RPA3P35244 AC133552.4-201ENST00000576103 676 ntBASIC6.28□□□□□ -1.4
RPA3P35244 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.28□□□□□ -1.4
RPA3P35244 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.28□□□□□ -1.4
RPA3P35244 AC027229.1-201ENST00000583887 253 ntBASIC6.28□□□□□ -1.4
RPA3P35244 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.28□□□□□ -1.4
RPA3P35244 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.28□□□□□ -1.4
RPA3P35244 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RPA3P35244 AP001267.4-201ENST00000602598 545 ntBASIC6.28□□□□□ -1.4
RPA3P35244 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.28□□□□□ -1.4
RPA3P35244 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RPA3P35244 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RPA3P35244 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
RPA3P35244 MSL3P1-202ENST00000440028 1468 ntBASIC6.28□□□□□ -1.4
RPA3P35244 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RPA3P35244 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.27□□□□□ -1.4
RPA3P35244 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.27□□□□□ -1.4
RPA3P35244 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RPA3P35244 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RPA3P35244 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RPA3P35244 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RPA3P35244 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.27□□□□□ -1.41
RPA3P35244 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RPA3P35244 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RPA3P35244 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC6.27□□□□□ -1.41
RPA3P35244 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RPA3P35244 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RPA3P35244 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.27□□□□□ -1.41
RPA3P35244 AL034417.1-201ENST00000399343 800 ntBASIC6.27□□□□□ -1.41
RPA3P35244 AL096800.1-201ENST00000405326 893 ntBASIC6.27□□□□□ -1.41
RPA3P35244 RN7SKP281-201ENST00000410472 352 ntBASIC6.27□□□□□ -1.41
RPA3P35244 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.27□□□□□ -1.41
RPA3P35244 AC092601.1-201ENST00000444526 383 ntBASIC6.27□□□□□ -1.41
RPA3P35244 AC112187.1-201ENST00000455837 479 ntBASIC6.27□□□□□ -1.41
RPA3P35244 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.27□□□□□ -1.41
RPA3P35244 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.27□□□□□ -1.41
RPA3P35244 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.27□□□□□ -1.41
RPA3P35244 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.27□□□□□ -1.41
RPA3P35244 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.27□□□□□ -1.41
RPA3P35244 AC023968.1-201ENST00000560719 475 ntBASIC6.27□□□□□ -1.41
RPA3P35244 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RPA3P35244 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.27□□□□□ -1.41
RPA3P35244 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.27□□□□□ -1.41
RPA3P35244 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.27□□□□□ -1.41
RPA3P35244 NPIPB1P-202ENST00000588786 828 ntBASIC6.27□□□□□ -1.41
RPA3P35244 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.27□□□□□ -1.41
RPA3P35244 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.27□□□□□ -1.41
RPA3P35244 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.27□□□□□ -1.41
RPA3P35244 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.27□□□□□ -1.41
RPA3P35244 AC068726.1-201ENST00000610993 341 ntBASIC6.27□□□□□ -1.41
RPA3P35244 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.27□□□□□ -1.41
RPA3P35244 SAMMSON-214ENST00000641395 1264 ntBASIC6.27□□□□□ -1.41
RPA3P35244 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
RPA3P35244 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
RPA3P35244 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
RPA3P35244 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RPA3P35244 AC087516.1-201ENST00000561236 2428 ntBASIC6.27□□□□□ -1.41
RPA3P35244 AL353743.3-201ENST00000442109 1468 ntBASIC6.27□□□□□ -1.41
RPA3P35244 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RPA3P35244 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
RPA3P35244 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RPA3P35244 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
RPA3P35244 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.27□□□□□ -1.41
RPA3P35244 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
RPA3P35244 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
RPA3P35244 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.27□□□□□ -1.41
RPA3P35244 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.27□□□□□ -1.41
RPA3P35244 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RPA3P35244 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RPA3P35244 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RPA3P35244 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RPA3P35244 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.26□□□□□ -1.41
RPA3P35244 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
RPA3P35244 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.26□□□□□ -1.41
RPA3P35244 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
RPA3P35244 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
RPA3P35244 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RPA3P35244 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
RPA3P35244 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
RPA3P35244 AL445238.1-204ENST00000400311 463 ntBASIC6.26□□□□□ -1.41
RPA3P35244 AL121977.1-201ENST00000401636 979 ntBASIC6.26□□□□□ -1.41
RPA3P35244 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RPA3P35244 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.26□□□□□ -1.41
RPA3P35244 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms