Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH3P22223 AL356986.1-201ENST00000604085 341 ntBASIC6.33□□□□□ -1.4
CDH3P22223 AC011891.2-201ENST00000604949 397 ntBASIC6.33□□□□□ -1.4
CDH3P22223 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.33□□□□□ -1.4
CDH3P22223 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDH3P22223 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.33□□□□□ -1.4
CDH3P22223 SNX18P10-201ENST00000625014 519 ntBASIC6.33□□□□□ -1.4
CDH3P22223 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH3P22223 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH3P22223 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH3P22223 AC073488.9-201ENST00000631601 754 ntBASIC6.33□□□□□ -1.4
CDH3P22223 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH3P22223 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CDH3P22223 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDH3P22223 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDH3P22223 PARP4P1-201ENST00000435945 2337 ntBASIC6.33□□□□□ -1.4
CDH3P22223 AC006511.3-201ENST00000624929 1783 ntBASIC6.33□□□□□ -1.4
CDH3P22223 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDH3P22223 AL592429.1-201ENST00000403909 1473 ntBASIC6.33□□□□□ -1.4
CDH3P22223 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CDH3P22223 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CDH3P22223 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDH3P22223 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CDH3P22223 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
CDH3P22223 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDH3P22223 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDH3P22223 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CDH3P22223 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.32□□□□□ -1.4
CDH3P22223 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDH3P22223 AC022613.3-201ENST00000560740 1346 ntBASIC6.32□□□□□ -1.4
CDH3P22223 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.32□□□□□ -1.4
CDH3P22223 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDH3P22223 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.32□□□□□ -1.4
CDH3P22223 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDH3P22223 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDH3P22223 RN7SKP77-201ENST00000363261 353 ntBASIC6.32□□□□□ -1.4
CDH3P22223 RNU1-84P-201ENST00000365447 164 ntBASIC6.32□□□□□ -1.4
CDH3P22223 AL451046.1-201ENST00000406097 534 ntBASIC6.32□□□□□ -1.4
CDH3P22223 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.32□□□□□ -1.4
CDH3P22223 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.32□□□□□ -1.4
CDH3P22223 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
CDH3P22223 Z68868.1-201ENST00000429048 544 ntBASIC6.32□□□□□ -1.4
CDH3P22223 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.32□□□□□ -1.4
CDH3P22223 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.32□□□□□ -1.4
CDH3P22223 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.32□□□□□ -1.4
CDH3P22223 REG1CP-206ENST00000447469 496 ntBASIC6.32□□□□□ -1.4
CDH3P22223 AC009963.4-201ENST00000448535 339 ntBASIC6.32□□□□□ -1.4
CDH3P22223 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.32□□□□□ -1.4
CDH3P22223 CR383656.1-201ENST00000484916 377 ntBASIC6.32□□□□□ -1.4
CDH3P22223 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.32□□□□□ -1.4
CDH3P22223 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.32□□□□□ -1.4
CDH3P22223 RNU6-964P-201ENST00000516524 69 ntBASIC6.32□□□□□ -1.4
CDH3P22223 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.32□□□□□ -1.4
CDH3P22223 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.32□□□□□ -1.4
CDH3P22223 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.32□□□□□ -1.4
CDH3P22223 AC090115.2-201ENST00000548060 883 ntBASIC6.32□□□□□ -1.4
CDH3P22223 MT1CP-201ENST00000567054 174 ntBASIC6.32□□□□□ -1.4
CDH3P22223 AC133552.4-201ENST00000576103 676 ntBASIC6.32□□□□□ -1.4
CDH3P22223 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC6.32□□□□□ -1.4
CDH3P22223 AC005828.7-201ENST00000607331 556 ntBASIC6.32□□□□□ -1.4
CDH3P22223 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.32□□□□□ -1.4
CDH3P22223 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.32□□□□□ -1.4
CDH3P22223 AC018692.2-201ENST00000624130 348 ntBASIC6.32□□□□□ -1.4
CDH3P22223 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.32□□□□□ -1.4
CDH3P22223 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
CDH3P22223 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDH3P22223 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDH3P22223 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDH3P22223 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.32□□□□□ -1.4
CDH3P22223 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.32□□□□□ -1.4
CDH3P22223 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDH3P22223 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDH3P22223 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDH3P22223 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.32□□□□□ -1.4
CDH3P22223 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDH3P22223 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDH3P22223 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CDH3P22223 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDH3P22223 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CDH3P22223 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CDH3P22223 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.31□□□□□ -1.4
CDH3P22223 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDH3P22223 AC116158.1-201ENST00000560231 2129 ntBASIC6.31□□□□□ -1.4
CDH3P22223 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.31□□□□□ -1.4
CDH3P22223 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
CDH3P22223 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CDH3P22223 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.31□□□□□ -1.4
CDH3P22223 PRELID1P1-201ENST00000403549 660 ntBASIC6.31□□□□□ -1.4
CDH3P22223 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.31□□□□□ -1.4
CDH3P22223 AL360013.1-201ENST00000419031 858 ntBASIC6.31□□□□□ -1.4
CDH3P22223 THEM7P-201ENST00000419556 672 ntBASIC6.31□□□□□ -1.4
CDH3P22223 OR5W1P-201ENST00000423705 938 ntBASIC6.31□□□□□ -1.4
CDH3P22223 RPSAP32-201ENST00000432681 526 ntBASIC6.31□□□□□ -1.4
CDH3P22223 RN7SL39P-201ENST00000462264 297 ntBASIC6.31□□□□□ -1.4
CDH3P22223 RN7SL561P-201ENST00000488553 281 ntBASIC6.31□□□□□ -1.4
CDH3P22223 AL117692.1-201ENST00000494283 713 ntBASIC6.31□□□□□ -1.4
CDH3P22223 AC131392.1-201ENST00000506490 633 ntBASIC6.31□□□□□ -1.4
CDH3P22223 AC022616.2-201ENST00000523185 300 ntBASIC6.31□□□□□ -1.4
CDH3P22223 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.31□□□□□ -1.4
CDH3P22223 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms