Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.96□□□□□ -1.46
COL5A1P20908 HNRNPA1P54-201ENST00000411857 9714 ntBASIC5.96□□□□□ -1.46
COL5A1P20908 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC5.96□□□□□ -1.46
COL5A1P20908 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
COL5A1P20908 SNORA43.1-201ENST00000364863 140 ntBASIC5.96□□□□□ -1.46
COL5A1P20908 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL5A1P20908 RPL35AP3-201ENST00000414680 288 ntBASIC5.96□□□□□ -1.46
COL5A1P20908 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.96□□□□□ -1.46
COL5A1P20908 AC093155.2-201ENST00000420734 937 ntBASIC5.96□□□□□ -1.46
COL5A1P20908 AL512637.1-201ENST00000439523 1231 ntBASIC5.96□□□□□ -1.46
COL5A1P20908 AL512593.1-201ENST00000444758 779 ntBASIC5.96□□□□□ -1.46
COL5A1P20908 AL445466.1-201ENST00000448432 357 ntBASIC5.96□□□□□ -1.46
COL5A1P20908 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.96□□□□□ -1.46
COL5A1P20908 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.96□□□□□ -1.46
COL5A1P20908 NENFP3-201ENST00000503735 313 ntBASIC5.96□□□□□ -1.46
COL5A1P20908 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.96□□□□□ -1.46
COL5A1P20908 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.96□□□□□ -1.46
COL5A1P20908 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC5.96□□□□□ -1.46
COL5A1P20908 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.96□□□□□ -1.46
COL5A1P20908 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.96□□□□□ -1.46
COL5A1P20908 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.96□□□□□ -1.46
COL5A1P20908 AL356801.1-201ENST00000559320 294 ntBASIC5.96□□□□□ -1.46
COL5A1P20908 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.96□□□□□ -1.46
COL5A1P20908 AC020916.2-201ENST00000591242 360 ntBASIC5.96□□□□□ -1.46
COL5A1P20908 AC024940.4-201ENST00000605507 246 ntBASIC5.96□□□□□ -1.46
COL5A1P20908 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.96□□□□□ -1.46
COL5A1P20908 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.96□□□□□ -1.46
COL5A1P20908 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.96□□□□□ -1.46
COL5A1P20908 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.96□□□□□ -1.46
COL5A1P20908 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL5A1P20908 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC5.96□□□□□ -1.46
COL5A1P20908 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.96□□□□□ -1.46
COL5A1P20908 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL5A1P20908 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL5A1P20908 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL5A1P20908 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL5A1P20908 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL5A1P20908 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.46
COL5A1P20908 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC5.96□□□□□ -1.46
COL5A1P20908 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL5A1P20908 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL5A1P20908 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL5A1P20908 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC5.95□□□□□ -1.46
COL5A1P20908 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.95□□□□□ -1.46
COL5A1P20908 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
COL5A1P20908 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL5A1P20908 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL5A1P20908 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL5A1P20908 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.95□□□□□ -1.46
COL5A1P20908 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL5A1P20908 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL5A1P20908 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
COL5A1P20908 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL5A1P20908 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.95□□□□□ -1.46
COL5A1P20908 OR3A2-201ENST00000408891 1076 ntBASIC5.95□□□□□ -1.46
COL5A1P20908 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.95□□□□□ -1.46
COL5A1P20908 NANOGP4-201ENST00000427230 913 ntBASIC5.95□□□□□ -1.46
COL5A1P20908 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL5A1P20908 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.95□□□□□ -1.46
COL5A1P20908 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.95□□□□□ -1.46
COL5A1P20908 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.95□□□□□ -1.46
COL5A1P20908 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.95□□□□□ -1.46
COL5A1P20908 OR4H6P-201ENST00000563771 921 ntBASIC5.95□□□□□ -1.46
COL5A1P20908 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
COL5A1P20908 AC027229.1-201ENST00000583887 253 ntBASIC5.95□□□□□ -1.46
COL5A1P20908 AL645933.2-201ENST00000606743 1207 ntBASIC5.95□□□□□ -1.46
COL5A1P20908 AL445647.2-201ENST00000615170 130 ntBASIC5.95□□□□□ -1.46
COL5A1P20908 AF117829.2-201ENST00000619538 361 ntBASIC5.95□□□□□ -1.46
COL5A1P20908 AL132640.3-201ENST00000630473 177 ntBASIC5.95□□□□□ -1.46
COL5A1P20908 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL5A1P20908 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL5A1P20908 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL5A1P20908 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL5A1P20908 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL5A1P20908 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
COL5A1P20908 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.95□□□□□ -1.46
COL5A1P20908 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC5.95□□□□□ -1.46
COL5A1P20908 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.95□□□□□ -1.46
COL5A1P20908 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL5A1P20908 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
COL5A1P20908 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.95□□□□□ -1.46
COL5A1P20908 PSG10P-201ENST00000501199 1500 ntBASIC5.95□□□□□ -1.46
COL5A1P20908 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL5A1P20908 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL5A1P20908 AC245096.1-201ENST00000413104 546 ntBASIC5.95□□□□□ -1.46
COL5A1P20908 AC245060.4-201ENST00000413293 1121 ntBASIC5.95□□□□□ -1.46
COL5A1P20908 AL513325.1-201ENST00000417716 1034 ntBASIC5.95□□□□□ -1.46
COL5A1P20908 FTLP8-201ENST00000446770 267 ntBASIC5.95□□□□□ -1.46
COL5A1P20908 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.95□□□□□ -1.46
COL5A1P20908 NDUFB5P1-201ENST00000508134 564 ntBASIC5.95□□□□□ -1.46
COL5A1P20908 AC010343.2-201ENST00000510162 224 ntBASIC5.95□□□□□ -1.46
COL5A1P20908 SNORA70.20-201ENST00000516848 126 ntBASIC5.95□□□□□ -1.46
COL5A1P20908 RN7SKP98-201ENST00000517070 156 ntBASIC5.95□□□□□ -1.46
COL5A1P20908 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.95□□□□□ -1.46
COL5A1P20908 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.95□□□□□ -1.46
COL5A1P20908 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.95□□□□□ -1.46
COL5A1P20908 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.95□□□□□ -1.46
COL5A1P20908 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.95□□□□□ -1.46
COL5A1P20908 OR8G3P-202ENST00000641572 1255 ntBASIC5.95□□□□□ -1.46
COL5A1P20908 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms