Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC073254.1-206ENST00000617813 907 ntTSL 5 BASIC6.6□□□□□ -1.35
ATF4P18848 C1orf137-201ENST00000624685 386 ntTSL 3 BASIC6.6□□□□□ -1.35
ATF4P18848 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.6□□□□□ -1.35
ATF4P18848 CDRT1-208ENST00000630868 794 ntBASIC6.6□□□□□ -1.35
ATF4P18848 LINC01002-228ENST00000633402 565 ntTSL 5 BASIC6.6□□□□□ -1.35
ATF4P18848 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC6.6□□□□□ -1.35
ATF4P18848 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
ATF4P18848 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ATF4P18848 CR381670.1-201ENST00000624291 1693 ntBASIC6.6□□□□□ -1.35
ATF4P18848 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
ATF4P18848 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
ATF4P18848 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ATF4P18848 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.6□□□□□ -1.35
ATF4P18848 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
ATF4P18848 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ATF4P18848 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
ATF4P18848 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC6.6□□□□□ -1.35
ATF4P18848 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ATF4P18848 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC6.6□□□□□ -1.35
ATF4P18848 GCSAML-211ENST00000623578 3959 ntAPPRIS ALT2 TSL 4 BASIC6.59□□□□□ -1.35
ATF4P18848 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
ATF4P18848 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
ATF4P18848 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
ATF4P18848 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
ATF4P18848 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
ATF4P18848 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.59□□□□□ -1.35
ATF4P18848 GLULP5-201ENST00000547831 1390 ntBASIC6.59□□□□□ -1.35
ATF4P18848 AC012360.3-201ENST00000610036 3449 ntBASIC6.59□□□□□ -1.35
ATF4P18848 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC6.59□□□□□ -1.35
ATF4P18848 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC6.59□□□□□ -1.35
ATF4P18848 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
ATF4P18848 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
ATF4P18848 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC6.59□□□□□ -1.35
ATF4P18848 ASNSP6-201ENST00000592770 1618 ntBASIC6.59□□□□□ -1.35
ATF4P18848 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
ATF4P18848 KRTAP11-1-201ENST00000332378 912 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
ATF4P18848 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
ATF4P18848 SCNM1-201ENST00000368902 869 ntTSL 2 BASIC6.59□□□□□ -1.35
ATF4P18848 MIR217-201ENST00000384817 110 ntBASIC6.59□□□□□ -1.35
ATF4P18848 ZNF816-ZNF321P-201ENST00000391777 1252 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
ATF4P18848 AC084880.1-201ENST00000392530 545 ntBASIC6.59□□□□□ -1.35
ATF4P18848 EIF4A1P8-201ENST00000394444 1190 ntBASIC6.59□□□□□ -1.35
ATF4P18848 AL035467.1-201ENST00000403583 686 ntBASIC6.59□□□□□ -1.35
ATF4P18848 RNU2-42P-201ENST00000410697 113 ntBASIC6.59□□□□□ -1.35
ATF4P18848 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC6.59□□□□□ -1.35
ATF4P18848 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.59□□□□□ -1.35
ATF4P18848 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC6.59□□□□□ -1.35
ATF4P18848 AC048351.1-201ENST00000420064 602 ntBASIC6.59□□□□□ -1.35
ATF4P18848 CELSR3-AS1-201ENST00000421275 196 ntTSL 2 BASIC6.59□□□□□ -1.35
ATF4P18848 E2F4P1-201ENST00000422443 1133 ntBASIC6.59□□□□□ -1.35
ATF4P18848 VN1R21P-201ENST00000426703 765 ntBASIC6.59□□□□□ -1.35
ATF4P18848 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.59□□□□□ -1.35
ATF4P18848 LINC00358-201ENST00000432697 1276 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
ATF4P18848 AL590103.1-201ENST00000434488 307 ntBASIC6.59□□□□□ -1.35
ATF4P18848 AL360221.1-201ENST00000445989 335 ntBASIC6.59□□□□□ -1.35
ATF4P18848 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC6.59□□□□□ -1.35
ATF4P18848 CASK-AS1-201ENST00000451126 515 ntTSL 2 BASIC6.59□□□□□ -1.35
ATF4P18848 HMGB1P4-201ENST00000455362 567 ntBASIC6.59□□□□□ -1.35
ATF4P18848 RN7SL302P-201ENST00000475999 300 ntBASIC6.59□□□□□ -1.35
ATF4P18848 ACTG1P13-201ENST00000486987 1043 ntBASIC6.59□□□□□ -1.35
ATF4P18848 SETP14-201ENST00000497538 873 ntBASIC6.59□□□□□ -1.35
ATF4P18848 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC6.59□□□□□ -1.35
ATF4P18848 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
ATF4P18848 AF186996.2-201ENST00000508347 907 ntBASIC6.59□□□□□ -1.35
ATF4P18848 AC005178.1-201ENST00000508392 440 ntBASIC6.59□□□□□ -1.35
ATF4P18848 LINC00967-202ENST00000517725 259 ntTSL 2 BASIC6.59□□□□□ -1.35
ATF4P18848 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC6.59□□□□□ -1.35
ATF4P18848 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC6.59□□□□□ -1.35
ATF4P18848 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC6.59□□□□□ -1.35
ATF4P18848 NAT2-202ENST00000520116 716 ntTSL 3 BASIC6.59□□□□□ -1.35
ATF4P18848 AP001189.2-201ENST00000527320 189 ntBASIC6.59□□□□□ -1.35
ATF4P18848 NPM1P50-201ENST00000532878 867 ntBASIC6.59□□□□□ -1.35
ATF4P18848 AC113143.1-201ENST00000534670 301 ntTSL 2 BASIC6.59□□□□□ -1.35
ATF4P18848 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC6.59□□□□□ -1.35
ATF4P18848 LMO3-222ENST00000540445 906 ntTSL 2 BASIC6.59□□□□□ -1.35
ATF4P18848 AC104261.1-202ENST00000557946 509 ntTSL 3 BASIC6.59□□□□□ -1.35
ATF4P18848 AC104261.1-201ENST00000560203 392 ntTSL 3 BASIC6.59□□□□□ -1.35
ATF4P18848 AC109597.1-201ENST00000564016 786 ntTSL 4 BASIC6.59□□□□□ -1.35
ATF4P18848 DNM1P31-201ENST00000564149 696 ntBASIC6.59□□□□□ -1.35
ATF4P18848 VN1R65P-201ENST00000566443 808 ntBASIC6.59□□□□□ -1.35
ATF4P18848 LINC00556-201ENST00000569603 412 ntBASIC6.59□□□□□ -1.35
ATF4P18848 RN7SL670P-201ENST00000577235 294 ntBASIC6.59□□□□□ -1.35
ATF4P18848 MIR4675-201ENST00000577898 77 ntBASIC6.59□□□□□ -1.35
ATF4P18848 DYM-207ENST00000578396 755 ntTSL 3 BASIC6.59□□□□□ -1.35
ATF4P18848 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.59□□□□□ -1.35
ATF4P18848 AL354733.2-205ENST00000590813 621 ntTSL 5 BASIC6.59□□□□□ -1.35
ATF4P18848 NAPA-AS1-202ENST00000594367 630 ntTSL 2 BASIC6.59□□□□□ -1.35
ATF4P18848 LINC00854-204ENST00000594691 649 ntAPPRIS P5 TSL 5 BASIC6.59□□□□□ -1.35
ATF4P18848 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.59□□□□□ -1.35
ATF4P18848 AC133552.5-201ENST00000604266 540 ntBASIC6.59□□□□□ -1.35
ATF4P18848 AL390816.3-201ENST00000604527 1066 ntBASIC6.59□□□□□ -1.35
ATF4P18848 AC064872.1-201ENST00000604823 1072 ntBASIC6.59□□□□□ -1.35
ATF4P18848 AL451049.1-201ENST00000608672 497 ntBASIC6.59□□□□□ -1.35
ATF4P18848 AL133243.1-201ENST00000614487 366 ntBASIC6.59□□□□□ -1.35
ATF4P18848 Metazoa_SRP.175-201ENST00000619837 250 ntBASIC6.59□□□□□ -1.35
ATF4P18848 AC008443.7-201ENST00000622195 246 ntBASIC6.59□□□□□ -1.35
ATF4P18848 AC026336.5-201ENST00000624455 738 ntBASIC6.59□□□□□ -1.35
ATF4P18848 AC009122.1-201ENST00000640559 1218 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
ATF4P18848 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC6.59□□□□□ -1.35
ATF4P18848 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms