Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMGA1P17096 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.42□□□□□ -1.38
HMGA1P17096 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMGA1P17096 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMGA1P17096 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMGA1P17096 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HMGA1P17096 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.42□□□□□ -1.38
HMGA1P17096 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.42□□□□□ -1.38
HMGA1P17096 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC6.42□□□□□ -1.38
HMGA1P17096 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HMGA1P17096 NBPF8-201ENST00000583271 5330 ntBASIC6.41□□□□□ -1.38
HMGA1P17096 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGA1P17096 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
HMGA1P17096 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGA1P17096 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGA1P17096 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGA1P17096 AF287957.1-201ENST00000607368 1595 ntBASIC6.41□□□□□ -1.38
HMGA1P17096 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.41□□□□□ -1.38
HMGA1P17096 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.41□□□□□ -1.38
HMGA1P17096 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGA1P17096 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGA1P17096 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.41□□□□□ -1.38
HMGA1P17096 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
HMGA1P17096 MIR323B-201ENST00000385269 82 ntBASIC6.41□□□□□ -1.38
HMGA1P17096 AL096800.1-201ENST00000405326 893 ntBASIC6.41□□□□□ -1.38
HMGA1P17096 AL354890.1-201ENST00000413730 346 ntBASIC6.41□□□□□ -1.38
HMGA1P17096 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.41□□□□□ -1.38
HMGA1P17096 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.41□□□□□ -1.38
HMGA1P17096 GAPDHP75-201ENST00000433910 943 ntBASIC6.41□□□□□ -1.38
HMGA1P17096 VN1R110P-201ENST00000438988 971 ntBASIC6.41□□□□□ -1.38
HMGA1P17096 RPS27AP3-201ENST00000453803 454 ntBASIC6.41□□□□□ -1.38
HMGA1P17096 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.41□□□□□ -1.38
HMGA1P17096 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.41□□□□□ -1.38
HMGA1P17096 AP004607.6-201ENST00000525033 1202 ntBASIC6.41□□□□□ -1.38
HMGA1P17096 KCTD9P4-201ENST00000526766 1166 ntBASIC6.41□□□□□ -1.38
HMGA1P17096 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.41□□□□□ -1.38
HMGA1P17096 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.41□□□□□ -1.38
HMGA1P17096 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.41□□□□□ -1.38
HMGA1P17096 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.41□□□□□ -1.38
HMGA1P17096 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.41□□□□□ -1.38
HMGA1P17096 RNU4ATAC-201ENST00000580972 127 ntBASIC6.41□□□□□ -1.38
HMGA1P17096 AC096861.1-201ENST00000616652 240 ntBASIC6.41□□□□□ -1.38
HMGA1P17096 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.41□□□□□ -1.38
HMGA1P17096 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.41□□□□□ -1.38
HMGA1P17096 AL450226.2-201ENST00000622913 439 ntBASIC6.41□□□□□ -1.38
HMGA1P17096 AL512356.3-201ENST00000623005 461 ntBASIC6.41□□□□□ -1.38
HMGA1P17096 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HMGA1P17096 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.41□□□□□ -1.38
HMGA1P17096 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGA1P17096 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
HMGA1P17096 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.41□□□□□ -1.38
HMGA1P17096 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HMGA1P17096 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGA1P17096 HDAC1P2-201ENST00000453661 1398 ntBASIC6.41□□□□□ -1.38
HMGA1P17096 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
HMGA1P17096 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGA1P17096 PRNCR1-201ENST00000635449 12727 ntBASIC6.41□□□□□ -1.38
HMGA1P17096 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGA1P17096 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.41□□□□□ -1.38
HMGA1P17096 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC6.41□□□□□ -1.38
HMGA1P17096 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGA1P17096 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
HMGA1P17096 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
HMGA1P17096 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
HMGA1P17096 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
HMGA1P17096 AC011815.2-201ENST00000618230 2021 ntBASIC6.4□□□□□ -1.38
HMGA1P17096 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HMGA1P17096 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.4□□□□□ -1.38
HMGA1P17096 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
HMGA1P17096 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
HMGA1P17096 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HMGA1P17096 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.4□□□□□ -1.38
HMGA1P17096 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.4□□□□□ -1.38
HMGA1P17096 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HMGA1P17096 AC023490.2-201ENST00000359859 470 ntBASIC6.4□□□□□ -1.38
HMGA1P17096 RPL35AP3-201ENST00000414680 288 ntBASIC6.4□□□□□ -1.38
HMGA1P17096 RPS7P8-201ENST00000418311 581 ntBASIC6.4□□□□□ -1.38
HMGA1P17096 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.4□□□□□ -1.38
HMGA1P17096 AC104843.2-201ENST00000427666 297 ntBASIC6.4□□□□□ -1.38
HMGA1P17096 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.4□□□□□ -1.38
HMGA1P17096 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.4□□□□□ -1.38
HMGA1P17096 NDUFS5P5-201ENST00000437256 321 ntBASIC6.4□□□□□ -1.38
HMGA1P17096 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.4□□□□□ -1.38
HMGA1P17096 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.4□□□□□ -1.38
HMGA1P17096 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
HMGA1P17096 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.4□□□□□ -1.38
HMGA1P17096 AC073594.1-201ENST00000462065 364 ntBASIC6.4□□□□□ -1.38
HMGA1P17096 RN7SL221P-201ENST00000466190 281 ntBASIC6.4□□□□□ -1.38
HMGA1P17096 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.4□□□□□ -1.38
HMGA1P17096 SCARNA18.1-201ENST00000516330 83 ntBASIC6.4□□□□□ -1.38
HMGA1P17096 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.4□□□□□ -1.38
HMGA1P17096 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.4□□□□□ -1.38
HMGA1P17096 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.4□□□□□ -1.38
HMGA1P17096 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.4□□□□□ -1.38
HMGA1P17096 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.4□□□□□ -1.38
HMGA1P17096 AC005244.1-201ENST00000582566 339 ntBASIC6.4□□□□□ -1.38
HMGA1P17096 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.4□□□□□ -1.38
HMGA1P17096 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.4□□□□□ -1.38
HMGA1P17096 MIR6793-201ENST00000612376 63 ntBASIC6.4□□□□□ -1.38
HMGA1P17096 AL355306.2-203ENST00000635102 1025 ntTSL 5 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms