Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.65□□□□□ -1.35
PDGFRAP16234 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
PDGFRAP16234 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.65□□□□□ -1.35
PDGFRAP16234 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
PDGFRAP16234 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.65□□□□□ -1.35
PDGFRAP16234 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
PDGFRAP16234 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
PDGFRAP16234 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PDGFRAP16234 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
PDGFRAP16234 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PDGFRAP16234 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.64□□□□□ -1.35
PDGFRAP16234 GUCY1B2-204ENST00000531898 1979 ntBASIC6.64□□□□□ -1.35
PDGFRAP16234 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PDGFRAP16234 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
PDGFRAP16234 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PDGFRAP16234 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PDGFRAP16234 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PDGFRAP16234 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.64□□□□□ -1.35
PDGFRAP16234 AC017078.1-201ENST00000416146 368 ntBASIC6.64□□□□□ -1.35
PDGFRAP16234 AL139158.1-201ENST00000424719 340 ntBASIC6.64□□□□□ -1.35
PDGFRAP16234 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.64□□□□□ -1.35
PDGFRAP16234 VPS25P1-201ENST00000455691 508 ntBASIC6.64□□□□□ -1.35
PDGFRAP16234 GM2AP2-201ENST00000491764 562 ntBASIC6.64□□□□□ -1.35
PDGFRAP16234 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
PDGFRAP16234 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.64□□□□□ -1.35
PDGFRAP16234 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.64□□□□□ -1.35
PDGFRAP16234 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC6.64□□□□□ -1.35
PDGFRAP16234 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.64□□□□□ -1.35
PDGFRAP16234 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.64□□□□□ -1.35
PDGFRAP16234 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.64□□□□□ -1.35
PDGFRAP16234 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.64□□□□□ -1.35
PDGFRAP16234 AC024589.2-201ENST00000605642 1294 ntBASIC6.64□□□□□ -1.35
PDGFRAP16234 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.64□□□□□ -1.35
PDGFRAP16234 AC004836.1-201ENST00000623032 634 ntBASIC6.64□□□□□ -1.35
PDGFRAP16234 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.64□□□□□ -1.35
PDGFRAP16234 AL596275.2-207ENST00000641188 675 ntBASIC6.64□□□□□ -1.35
PDGFRAP16234 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.64□□□□□ -1.35
PDGFRAP16234 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PDGFRAP16234 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
PDGFRAP16234 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.64□□□□□ -1.35
PDGFRAP16234 AP004289.1-201ENST00000436307 2205 ntBASIC6.64□□□□□ -1.35
PDGFRAP16234 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PDGFRAP16234 LINC01613-201ENST00000561476 2780 ntBASIC6.63□□□□□ -1.35
PDGFRAP16234 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.63□□□□□ -1.35
PDGFRAP16234 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.63□□□□□ -1.35
PDGFRAP16234 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PDGFRAP16234 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.63□□□□□ -1.35
PDGFRAP16234 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PDGFRAP16234 RPL11P4-201ENST00000332269 436 ntBASIC6.63□□□□□ -1.35
PDGFRAP16234 SNORD8-201ENST00000363915 110 ntBASIC6.63□□□□□ -1.35
PDGFRAP16234 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
PDGFRAP16234 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PDGFRAP16234 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
PDGFRAP16234 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.63□□□□□ -1.35
PDGFRAP16234 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PDGFRAP16234 PSMA6P1-201ENST00000400275 741 ntBASIC6.63□□□□□ -1.35
PDGFRAP16234 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.35
PDGFRAP16234 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.63□□□□□ -1.35
PDGFRAP16234 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.63□□□□□ -1.35
PDGFRAP16234 AL359885.1-201ENST00000415786 903 ntBASIC6.63□□□□□ -1.35
PDGFRAP16234 AC002127.1-201ENST00000421305 225 ntBASIC6.63□□□□□ -1.35
PDGFRAP16234 AC007568.1-201ENST00000422912 471 ntBASIC6.63□□□□□ -1.35
PDGFRAP16234 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
PDGFRAP16234 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.63□□□□□ -1.35
PDGFRAP16234 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.63□□□□□ -1.35
PDGFRAP16234 OR2L9P-201ENST00000444456 913 ntBASIC6.63□□□□□ -1.35
PDGFRAP16234 AL451063.1-201ENST00000450164 1133 ntBASIC6.63□□□□□ -1.35
PDGFRAP16234 RN7SL643P-201ENST00000471845 291 ntBASIC6.63□□□□□ -1.35
PDGFRAP16234 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.63□□□□□ -1.35
PDGFRAP16234 H3F3AP5-201ENST00000475267 429 ntBASIC6.63□□□□□ -1.35
PDGFRAP16234 MARK2P8-201ENST00000476069 952 ntBASIC6.63□□□□□ -1.35
PDGFRAP16234 AC005017.1-201ENST00000482002 490 ntBASIC6.63□□□□□ -1.35
PDGFRAP16234 RPS27P20-201ENST00000492051 246 ntBASIC6.63□□□□□ -1.35
PDGFRAP16234 AC110373.1-201ENST00000505994 3505 ntBASIC6.63□□□□□ -1.35
PDGFRAP16234 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.63□□□□□ -1.35
PDGFRAP16234 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC6.63□□□□□ -1.35
PDGFRAP16234 HMGN1P16-201ENST00000508308 283 ntBASIC6.63□□□□□ -1.35
PDGFRAP16234 AC010343.2-201ENST00000510162 224 ntBASIC6.63□□□□□ -1.35
PDGFRAP16234 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.63□□□□□ -1.35
PDGFRAP16234 IGHV4-55-201ENST00000520889 368 ntBASIC6.63□□□□□ -1.35
PDGFRAP16234 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.63□□□□□ -1.35
PDGFRAP16234 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.63□□□□□ -1.35
PDGFRAP16234 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.63□□□□□ -1.35
PDGFRAP16234 AC009729.1-201ENST00000548873 1133 ntBASIC6.63□□□□□ -1.35
PDGFRAP16234 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.63□□□□□ -1.35
PDGFRAP16234 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.63□□□□□ -1.35
PDGFRAP16234 LINC01616-201ENST00000561816 2280 ntBASIC6.63□□□□□ -1.35
PDGFRAP16234 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.63□□□□□ -1.35
PDGFRAP16234 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.63□□□□□ -1.35
PDGFRAP16234 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.63□□□□□ -1.35
PDGFRAP16234 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.63□□□□□ -1.35
PDGFRAP16234 AL136984.1-201ENST00000607611 1893 ntBASIC6.63□□□□□ -1.35
PDGFRAP16234 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.63□□□□□ -1.35
PDGFRAP16234 AC006511.3-201ENST00000624929 1783 ntBASIC6.63□□□□□ -1.35
PDGFRAP16234 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.63□□□□□ -1.35
PDGFRAP16234 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.63□□□□□ -1.35
PDGFRAP16234 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PDGFRAP16234 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PDGFRAP16234 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PDGFRAP16234 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms