Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DOBP13765 AC092601.1-201ENST00000444526 383 ntBASIC5.7□□□□□ -1.5
HLA-DOBP13765 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DOBP13765 HMGN1P8-201ENST00000463578 288 ntBASIC5.7□□□□□ -1.5
HLA-DOBP13765 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DOBP13765 AC106800.3-201ENST00000511389 308 ntBASIC5.7□□□□□ -1.5
HLA-DOBP13765 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DOBP13765 RNU6-964P-201ENST00000516524 69 ntBASIC5.7□□□□□ -1.5
HLA-DOBP13765 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.7□□□□□ -1.5
HLA-DOBP13765 COX6B1P4-201ENST00000519826 484 ntBASIC5.7□□□□□ -1.5
HLA-DOBP13765 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-DOBP13765 IGHV1-14-201ENST00000523391 241 ntBASIC5.7□□□□□ -1.5
HLA-DOBP13765 AP005639.1-201ENST00000526939 192 ntBASIC5.7□□□□□ -1.5
HLA-DOBP13765 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DOBP13765 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DOBP13765 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-DOBP13765 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DOBP13765 AC023968.1-201ENST00000560719 475 ntBASIC5.7□□□□□ -1.5
HLA-DOBP13765 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DOBP13765 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.7□□□□□ -1.5
HLA-DOBP13765 PRELID3BP3-201ENST00000584963 545 ntBASIC5.7□□□□□ -1.5
HLA-DOBP13765 MIR212-201ENST00000586026 110 ntBASIC5.7□□□□□ -1.5
HLA-DOBP13765 GMCL1P2-201ENST00000605230 823 ntBASIC5.7□□□□□ -1.5
HLA-DOBP13765 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DOBP13765 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DOBP13765 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
HLA-DOBP13765 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HLA-DOBP13765 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DOBP13765 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DOBP13765 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DOBP13765 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-DOBP13765 AC110716.2-201ENST00000563865 3945 ntBASIC5.7□□□□□ -1.5
HLA-DOBP13765 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-DOBP13765 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DOBP13765 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DOBP13765 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DOBP13765 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DOBP13765 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DOBP13765 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
HLA-DOBP13765 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DOBP13765 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DOBP13765 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HLA-DOBP13765 AC089998.1-201ENST00000548575 3141 ntBASIC5.69□□□□□ -1.5
HLA-DOBP13765 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
HLA-DOBP13765 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DOBP13765 AC011369.2-201ENST00000624423 1567 ntBASIC5.69□□□□□ -1.5
HLA-DOBP13765 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DOBP13765 MAPK10-287ENST00000641217 3037 ntBASIC5.69□□□□□ -1.5
HLA-DOBP13765 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DOBP13765 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DOBP13765 SNORD16-201ENST00000362803 99 ntBASIC5.69□□□□□ -1.5
HLA-DOBP13765 RNA5SP478-201ENST00000364657 115 ntBASIC5.69□□□□□ -1.5
HLA-DOBP13765 AC003045.1-201ENST00000398779 713 ntBASIC5.69□□□□□ -1.5
HLA-DOBP13765 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DOBP13765 GTF3AP6-201ENST00000432585 986 ntBASIC5.69□□□□□ -1.5
HLA-DOBP13765 RPEP4-201ENST00000437636 602 ntBASIC5.69□□□□□ -1.5
HLA-DOBP13765 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DOBP13765 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DOBP13765 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DOBP13765 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DOBP13765 COX4I1P2-201ENST00000447446 547 ntBASIC5.69□□□□□ -1.5
HLA-DOBP13765 RARRES2P3-201ENST00000457739 473 ntBASIC5.69□□□□□ -1.5
HLA-DOBP13765 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
HLA-DOBP13765 OR9A1P-202ENST00000484361 945 ntBASIC5.69□□□□□ -1.5
HLA-DOBP13765 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DOBP13765 RNA5SP418-201ENST00000515951 117 ntBASIC5.69□□□□□ -1.5
HLA-DOBP13765 AC113191.1-201ENST00000517759 403 ntBASIC5.69□□□□□ -1.5
HLA-DOBP13765 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DOBP13765 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DOBP13765 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DOBP13765 DPPA3P2-201ENST00000553589 478 ntBASIC5.69□□□□□ -1.5
HLA-DOBP13765 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DOBP13765 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DOBP13765 AC135626.1-201ENST00000556983 435 ntBASIC5.69□□□□□ -1.5
HLA-DOBP13765 AC037479.1-201ENST00000558361 625 ntBASIC5.69□□□□□ -1.5
HLA-DOBP13765 AL731537.2-201ENST00000561565 951 ntBASIC5.69□□□□□ -1.5
HLA-DOBP13765 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DOBP13765 RN7SL66P-201ENST00000582099 264 ntBASIC5.69□□□□□ -1.5
HLA-DOBP13765 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DOBP13765 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DOBP13765 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DOBP13765 GAPDHP41-201ENST00000613707 975 ntBASIC5.69□□□□□ -1.5
HLA-DOBP13765 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DOBP13765 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.69□□□□□ -1.5
HLA-DOBP13765 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DOBP13765 AL139254.3-201ENST00000641097 674 ntBASIC5.69□□□□□ -1.5
HLA-DOBP13765 AL163152.1-201ENST00000642001 374 ntBASIC5.69□□□□□ -1.5
HLA-DOBP13765 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
HLA-DOBP13765 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DOBP13765 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
HLA-DOBP13765 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DOBP13765 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DOBP13765 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DOBP13765 GUCY1B2-204ENST00000531898 1979 ntBASIC5.69□□□□□ -1.5
HLA-DOBP13765 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
HLA-DOBP13765 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DOBP13765 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DOBP13765 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DOBP13765 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DOBP13765 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms