Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC008055.1-201ENST00000547032 609 ntBASIC6.64□□□□□ -1.35
APOEP02649 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
APOEP02649 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.64□□□□□ -1.35
APOEP02649 AC005828.7-201ENST00000607331 556 ntBASIC6.64□□□□□ -1.35
APOEP02649 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
APOEP02649 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
APOEP02649 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.64□□□□□ -1.35
APOEP02649 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
APOEP02649 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
APOEP02649 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
APOEP02649 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
APOEP02649 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.64□□□□□ -1.35
APOEP02649 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
APOEP02649 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.64□□□□□ -1.35
APOEP02649 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
APOEP02649 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
APOEP02649 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.63□□□□□ -1.35
APOEP02649 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
APOEP02649 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
APOEP02649 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
APOEP02649 AL359976.1-201ENST00000418655 3528 ntBASIC6.63□□□□□ -1.35
APOEP02649 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.63□□□□□ -1.35
APOEP02649 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.63□□□□□ -1.35
APOEP02649 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
APOEP02649 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.63□□□□□ -1.35
APOEP02649 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
APOEP02649 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.63□□□□□ -1.35
APOEP02649 SNORA70H-201ENST00000383910 135 ntBASIC6.63□□□□□ -1.35
APOEP02649 SNORA70J-201ENST00000384182 135 ntBASIC6.63□□□□□ -1.35
APOEP02649 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
APOEP02649 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.63□□□□□ -1.35
APOEP02649 AL139158.1-201ENST00000424719 340 ntBASIC6.63□□□□□ -1.35
APOEP02649 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.63□□□□□ -1.35
APOEP02649 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.63□□□□□ -1.35
APOEP02649 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.63□□□□□ -1.35
APOEP02649 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.63□□□□□ -1.35
APOEP02649 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
APOEP02649 GTF2IP14-201ENST00000441415 586 ntBASIC6.63□□□□□ -1.35
APOEP02649 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
APOEP02649 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.63□□□□□ -1.35
APOEP02649 AC113367.2-201ENST00000505749 160 ntBASIC6.63□□□□□ -1.35
APOEP02649 HMGN1P16-201ENST00000508308 283 ntBASIC6.63□□□□□ -1.35
APOEP02649 IGHV1-14-201ENST00000523391 241 ntBASIC6.63□□□□□ -1.35
APOEP02649 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.63□□□□□ -1.35
APOEP02649 AP005639.1-201ENST00000526939 192 ntBASIC6.63□□□□□ -1.35
APOEP02649 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.63□□□□□ -1.35
APOEP02649 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.63□□□□□ -1.35
APOEP02649 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
APOEP02649 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.63□□□□□ -1.35
APOEP02649 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
APOEP02649 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.63□□□□□ -1.35
APOEP02649 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.63□□□□□ -1.35
APOEP02649 uc_338.29-201ENST00000615099 168 ntBASIC6.63□□□□□ -1.35
APOEP02649 AC105235.1-201ENST00000623208 1816 ntBASIC6.63□□□□□ -1.35
APOEP02649 AC009120.7-201ENST00000623452 780 ntBASIC6.63□□□□□ -1.35
APOEP02649 CASC19-246ENST00000641625 1606 ntBASIC6.63□□□□□ -1.35
APOEP02649 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
APOEP02649 AC110373.1-201ENST00000505994 3505 ntBASIC6.63□□□□□ -1.35
APOEP02649 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.63□□□□□ -1.35
APOEP02649 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
APOEP02649 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
APOEP02649 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
APOEP02649 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
APOEP02649 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.62□□□□□ -1.35
APOEP02649 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
APOEP02649 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.62□□□□□ -1.35
APOEP02649 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
APOEP02649 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.62□□□□□ -1.35
APOEP02649 AL451142.1-201ENST00000375867 775 ntBASIC6.62□□□□□ -1.35
APOEP02649 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
APOEP02649 DHFRP2-201ENST00000414224 547 ntBASIC6.62□□□□□ -1.35
APOEP02649 AC007568.1-201ENST00000422912 471 ntBASIC6.62□□□□□ -1.35
APOEP02649 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.62□□□□□ -1.35
APOEP02649 VN1R20P-201ENST00000425215 966 ntBASIC6.62□□□□□ -1.35
APOEP02649 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.62□□□□□ -1.35
APOEP02649 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.62□□□□□ -1.35
APOEP02649 RN7SL643P-201ENST00000471845 291 ntBASIC6.62□□□□□ -1.35
APOEP02649 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.62□□□□□ -1.35
APOEP02649 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.62□□□□□ -1.35
APOEP02649 IGHV4-55-201ENST00000520889 368 ntBASIC6.62□□□□□ -1.35
APOEP02649 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.62□□□□□ -1.35
APOEP02649 AC073916.1-201ENST00000545095 130 ntBASIC6.62□□□□□ -1.35
APOEP02649 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.62□□□□□ -1.35
APOEP02649 AC021422.1-201ENST00000621212 473 ntBASIC6.62□□□□□ -1.35
APOEP02649 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.62□□□□□ -1.35
APOEP02649 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.62□□□□□ -1.35
APOEP02649 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.62□□□□□ -1.35
APOEP02649 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
APOEP02649 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.62□□□□□ -1.35
APOEP02649 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
APOEP02649 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
APOEP02649 AL157831.2-201ENST00000564681 3095 ntBASIC6.62□□□□□ -1.35
APOEP02649 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
APOEP02649 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
APOEP02649 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.62□□□□□ -1.35
APOEP02649 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
APOEP02649 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
APOEP02649 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
APOEP02649 VN2R1P-201ENST00000449668 1743 ntBASIC6.62□□□□□ -1.35
APOEP02649 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms