Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.27□□□□□ -1.57
UPK1BO75841 RPSAP48-201ENST00000466509 889 ntBASIC5.27□□□□□ -1.57
UPK1BO75841 RPL23AP40-201ENST00000487630 390 ntBASIC5.27□□□□□ -1.57
UPK1BO75841 COX6B1P2-201ENST00000489624 230 ntBASIC5.27□□□□□ -1.57
UPK1BO75841 AC069304.1-201ENST00000491593 704 ntBASIC5.27□□□□□ -1.57
UPK1BO75841 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC5.27□□□□□ -1.57
UPK1BO75841 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC5.27□□□□□ -1.57
UPK1BO75841 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.27□□□□□ -1.57
UPK1BO75841 RNA5SP318-201ENST00000516352 92 ntBASIC5.27□□□□□ -1.57
UPK1BO75841 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC5.27□□□□□ -1.57
UPK1BO75841 NATP-201ENST00000523491 878 ntBASIC5.27□□□□□ -1.57
UPK1BO75841 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.27□□□□□ -1.57
UPK1BO75841 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.27□□□□□ -1.57
UPK1BO75841 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.27□□□□□ -1.57
UPK1BO75841 AC007346.2-201ENST00000564816 892 ntBASIC5.27□□□□□ -1.57
UPK1BO75841 IGHV3OR16-15-201ENST00000565463 414 ntBASIC5.27□□□□□ -1.57
UPK1BO75841 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.27□□□□□ -1.57
UPK1BO75841 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.27□□□□□ -1.57
UPK1BO75841 AL589863.1-201ENST00000595383 631 ntBASIC5.27□□□□□ -1.57
UPK1BO75841 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.27□□□□□ -1.57
UPK1BO75841 AC211469.1-201ENST00000604263 394 ntBASIC5.27□□□□□ -1.57
UPK1BO75841 AC007938.2-201ENST00000604666 2634 ntBASIC5.27□□□□□ -1.57
UPK1BO75841 NDUFB9P1-201ENST00000604683 510 ntBASIC5.27□□□□□ -1.57
UPK1BO75841 AL034374.2-201ENST00000605281 548 ntBASIC5.27□□□□□ -1.57
UPK1BO75841 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC5.27□□□□□ -1.57
UPK1BO75841 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.27□□□□□ -1.57
UPK1BO75841 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.27□□□□□ -1.57
UPK1BO75841 AL137067.2-201ENST00000621202 131 ntBASIC5.27□□□□□ -1.57
UPK1BO75841 AC008626.2-201ENST00000624425 248 ntBASIC5.27□□□□□ -1.57
UPK1BO75841 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.27□□□□□ -1.57
UPK1BO75841 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
UPK1BO75841 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.27□□□□□ -1.57
UPK1BO75841 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
UPK1BO75841 AC010401.2-201ENST00000575137 4934 ntBASIC5.27□□□□□ -1.57
UPK1BO75841 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
UPK1BO75841 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
UPK1BO75841 AC011755.1-201ENST00000623763 2049 ntBASIC5.26□□□□□ -1.57
UPK1BO75841 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.26□□□□□ -1.57
UPK1BO75841 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.26□□□□□ -1.57
UPK1BO75841 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.26□□□□□ -1.57
UPK1BO75841 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.26□□□□□ -1.57
UPK1BO75841 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
UPK1BO75841 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.26□□□□□ -1.57
UPK1BO75841 AC011933.2-201ENST00000578539 2790 ntBASIC5.26□□□□□ -1.57
UPK1BO75841 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
UPK1BO75841 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.26□□□□□ -1.57
UPK1BO75841 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
UPK1BO75841 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
UPK1BO75841 AC019077.1-201ENST00000356499 397 ntTSL 3 BASIC5.26□□□□□ -1.57
UPK1BO75841 RNA5SP321-201ENST00000362722 111 ntBASIC5.26□□□□□ -1.57
UPK1BO75841 SNORD16-201ENST00000362803 99 ntBASIC5.26□□□□□ -1.57
UPK1BO75841 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
UPK1BO75841 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
UPK1BO75841 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.26□□□□□ -1.57
UPK1BO75841 RN7SKP166-201ENST00000410812 305 ntBASIC5.26□□□□□ -1.57
UPK1BO75841 RNA5SP280-201ENST00000411230 115 ntBASIC5.26□□□□□ -1.57
UPK1BO75841 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC5.26□□□□□ -1.57
UPK1BO75841 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.26□□□□□ -1.57
UPK1BO75841 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.26□□□□□ -1.57
UPK1BO75841 AL353615.1-201ENST00000450850 390 ntTSL 3 BASIC5.26□□□□□ -1.57
UPK1BO75841 RNF7P1-201ENST00000478598 342 ntBASIC5.26□□□□□ -1.57
UPK1BO75841 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC5.26□□□□□ -1.57
UPK1BO75841 RNU6-964P-201ENST00000516524 69 ntBASIC5.26□□□□□ -1.57
UPK1BO75841 AC100849.2-201ENST00000518324 519 ntTSL 2 BASIC5.26□□□□□ -1.57
UPK1BO75841 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.26□□□□□ -1.57
UPK1BO75841 SSU72P6-201ENST00000532644 488 ntBASIC5.26□□□□□ -1.57
UPK1BO75841 AC068993.1-201ENST00000546724 589 ntBASIC5.26□□□□□ -1.57
UPK1BO75841 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC5.26□□□□□ -1.57
UPK1BO75841 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.26□□□□□ -1.57
UPK1BO75841 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC5.26□□□□□ -1.57
UPK1BO75841 AC023794.4-201ENST00000551732 754 ntTSL 5 BASIC5.26□□□□□ -1.57
UPK1BO75841 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC5.26□□□□□ -1.57
UPK1BO75841 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC5.26□□□□□ -1.57
UPK1BO75841 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC5.26□□□□□ -1.57
UPK1BO75841 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.26□□□□□ -1.57
UPK1BO75841 RNU4ATAC-201ENST00000580972 127 ntBASIC5.26□□□□□ -1.57
UPK1BO75841 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
UPK1BO75841 AC245052.7-201ENST00000601161 359 ntBASIC5.26□□□□□ -1.57
UPK1BO75841 AL513327.3-201ENST00000602618 469 ntBASIC5.26□□□□□ -1.57
UPK1BO75841 AL035425.4-201ENST00000624509 1063 ntBASIC5.26□□□□□ -1.57
UPK1BO75841 AC026108.1-201ENST00000635444 547 ntBASIC5.26□□□□□ -1.57
UPK1BO75841 FGL2-202ENST00000637771 989 ntBASIC5.26□□□□□ -1.57
UPK1BO75841 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
UPK1BO75841 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.26□□□□□ -1.57
UPK1BO75841 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
UPK1BO75841 HSP90AA2P-201ENST00000530115 2196 ntBASIC5.26□□□□□ -1.57
UPK1BO75841 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.26□□□□□ -1.57
UPK1BO75841 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
UPK1BO75841 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.26□□□□□ -1.57
UPK1BO75841 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.26□□□□□ -1.57
UPK1BO75841 AC130304.1-201ENST00000622942 2385 ntBASIC5.26□□□□□ -1.57
UPK1BO75841 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.26□□□□□ -1.57
UPK1BO75841 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
UPK1BO75841 PSMC1P4-201ENST00000515236 1327 ntBASIC5.25□□□□□ -1.57
UPK1BO75841 AC005005.4-201ENST00000623789 16698 ntBASIC5.25□□□□□ -1.57
UPK1BO75841 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
UPK1BO75841 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
UPK1BO75841 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
UPK1BO75841 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.25□□□□□ -1.57
UPK1BO75841 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms