Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 BMX-202ENST00000348343 2531 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RNF40O75150 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC8.89□□□□□ -0.99
RNF40O75150 MAPK10-347ENST00000641762 2856 ntBASIC8.89□□□□□ -0.99
RNF40O75150 ZSCAN16-201ENST00000340487 1328 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RNF40O75150 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC8.89□□□□□ -0.99
RNF40O75150 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RNF40O75150 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RNF40O75150 OR10AB1P-202ENST00000641219 1686 ntBASIC8.89□□□□□ -0.99
RNF40O75150 AC025580.2-204ENST00000560077 2399 ntTSL 5 BASIC8.89□□□□□ -0.99
RNF40O75150 MBD3L1-201ENST00000305625 748 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
RNF40O75150 Y_RNA.138-201ENST00000363462 102 ntBASIC8.89□□□□□ -0.99
RNF40O75150 RNU6-660P-201ENST00000364566 109 ntBASIC8.89□□□□□ -0.99
RNF40O75150 SNORA63C-201ENST00000364578 129 ntBASIC8.89□□□□□ -0.99
RNF40O75150 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
RNF40O75150 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
RNF40O75150 MIR606-201ENST00000384851 96 ntBASIC8.89□□□□□ -0.99
RNF40O75150 TRBV6-1-201ENST00000390353 401 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
RNF40O75150 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
RNF40O75150 MTCO3P40-201ENST00000392516 676 ntBASIC8.89□□□□□ -0.99
RNF40O75150 RPS3AP23-201ENST00000401762 784 ntBASIC8.89□□□□□ -0.99
RNF40O75150 MED15P8-201ENST00000411601 545 ntBASIC8.89□□□□□ -0.99
RNF40O75150 AL049734.1-201ENST00000422384 608 ntBASIC8.89□□□□□ -0.99
RNF40O75150 AL353729.1-201ENST00000425044 720 ntBASIC8.89□□□□□ -0.99
RNF40O75150 AL807761.3-201ENST00000427833 329 ntTSL 3 BASIC8.89□□□□□ -0.99
RNF40O75150 AC006450.2-201ENST00000429482 581 ntTSL 2 BASIC8.89□□□□□ -0.99
RNF40O75150 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC8.89□□□□□ -0.99
RNF40O75150 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
RNF40O75150 PIP5K1P2-201ENST00000437005 1120 ntBASIC8.89□□□□□ -0.99
RNF40O75150 IFNWP5-201ENST00000445100 588 ntBASIC8.89□□□□□ -0.99
RNF40O75150 AL365436.1-201ENST00000452587 495 ntBASIC8.89□□□□□ -0.99
RNF40O75150 BZW1P1-201ENST00000454901 1240 ntBASIC8.89□□□□□ -0.99
RNF40O75150 IFNA22P-201ENST00000458710 570 ntBASIC8.89□□□□□ -0.99
RNF40O75150 SNORD42A-201ENST00000459584 64 ntBASIC8.89□□□□□ -0.99
RNF40O75150 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC8.89□□□□□ -0.99
RNF40O75150 PFN2-209ENST00000481275 560 ntTSL 4 BASIC8.89□□□□□ -0.99
RNF40O75150 RN7SL792P-201ENST00000496286 305 ntBASIC8.89□□□□□ -0.99
RNF40O75150 SRP72-202ENST00000504757 745 ntTSL 2 BASIC8.89□□□□□ -0.99
RNF40O75150 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC8.89□□□□□ -0.99
RNF40O75150 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC8.89□□□□□ -0.99
RNF40O75150 LINC02517-201ENST00000509453 492 ntTSL 2 BASIC8.89□□□□□ -0.99
RNF40O75150 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
RNF40O75150 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC8.89□□□□□ -0.99
RNF40O75150 IGHVII-22-1-201ENST00000517888 265 ntBASIC8.89□□□□□ -0.99
RNF40O75150 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC8.89□□□□□ -0.99
RNF40O75150 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
RNF40O75150 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC8.89□□□□□ -0.99
RNF40O75150 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC8.89□□□□□ -0.99
RNF40O75150 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC8.89□□□□□ -0.99
RNF40O75150 AL109628.2-201ENST00000554037 201 ntBASIC8.89□□□□□ -0.99
RNF40O75150 MIR4314-201ENST00000583321 92 ntBASIC8.89□□□□□ -0.99
RNF40O75150 SNRPCP20-201ENST00000588011 210 ntBASIC8.89□□□□□ -0.99
RNF40O75150 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC8.89□□□□□ -0.99
RNF40O75150 ZNF611-214ENST00000600943 560 ntTSL 4 BASIC8.89□□□□□ -0.99
RNF40O75150 AL117372.1-201ENST00000613711 459 ntTSL 4 BASIC8.89□□□□□ -0.99
RNF40O75150 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC8.89□□□□□ -0.99
RNF40O75150 KRTAP7-1-201ENST00000621162 721 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
RNF40O75150 AC132825.8-201ENST00000640783 297 ntBASIC8.89□□□□□ -0.99
RNF40O75150 MSL3-201ENST00000312196 2345 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RNF40O75150 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC8.89□□□□□ -0.99
RNF40O75150 TBX5-AS1-201ENST00000528549 3620 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
RNF40O75150 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC8.89□□□□□ -0.99
RNF40O75150 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC8.89□□□□□ -0.99
RNF40O75150 SNRPB2-201ENST00000246071 2452 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RNF40O75150 GBP7-201ENST00000294671 2454 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
RNF40O75150 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
RNF40O75150 TMEM68-201ENST00000334667 2401 ntTSL 2 BASIC8.89□□□□□ -0.99
RNF40O75150 KARSP1-201ENST00000451871 1752 ntBASIC8.89□□□□□ -0.99
RNF40O75150 MITF-203ENST00000328528 4680 ntTSL 5 BASIC8.89□□□□□ -0.99
RNF40O75150 AC092646.2-201ENST00000431242 2095 ntBASIC8.89□□□□□ -0.99
RNF40O75150 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
RNF40O75150 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RNF40O75150 LARGE-AS1-203ENST00000438159 2618 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RNF40O75150 CASP14-201ENST00000427043 3241 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RNF40O75150 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RNF40O75150 PACRG-201ENST00000337019 1619 ntTSL 2 BASIC8.88□□□□□ -0.99
RNF40O75150 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RNF40O75150 AC002540.1-201ENST00000625023 1349 ntBASIC8.88□□□□□ -0.99
RNF40O75150 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RNF40O75150 MT-RNR2-201ENST00000387347 1559 ntBASIC8.88□□□□□ -0.99
RNF40O75150 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RNF40O75150 AC103591.2-201ENST00000265259 766 ntBASIC8.88□□□□□ -0.99
RNF40O75150 RNA5SP336-201ENST00000364189 117 ntBASIC8.88□□□□□ -0.99
RNF40O75150 RNU6-297P-201ENST00000384636 107 ntBASIC8.88□□□□□ -0.99
RNF40O75150 MIR614-201ENST00000385082 90 ntBASIC8.88□□□□□ -0.99
RNF40O75150 AL391422.1-201ENST00000402155 436 ntBASIC8.88□□□□□ -0.99
RNF40O75150 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RNF40O75150 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC8.88□□□□□ -0.99
RNF40O75150 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC8.88□□□□□ -0.99
RNF40O75150 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC8.88□□□□□ -0.99
RNF40O75150 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC8.88□□□□□ -0.99
RNF40O75150 AC009237.2-201ENST00000421358 284 ntBASIC8.88□□□□□ -0.99
RNF40O75150 DEFA9P-201ENST00000433042 285 ntBASIC8.88□□□□□ -0.99
RNF40O75150 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC8.88□□□□□ -0.99
RNF40O75150 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC8.88□□□□□ -0.99
RNF40O75150 UBE2Q1-AS1-201ENST00000441613 432 ntTSL 3 BASIC8.88□□□□□ -0.99
RNF40O75150 IPO7P1-201ENST00000442031 636 ntBASIC8.88□□□□□ -0.99
RNF40O75150 AL022238.1-201ENST00000442557 355 ntBASIC8.88□□□□□ -0.99
RNF40O75150 MIR4435-2HG-211ENST00000443467 826 ntTSL 3 BASIC8.88□□□□□ -0.99
RNF40O75150 AC244505.5-201ENST00000443639 207 ntBASIC8.88□□□□□ -0.99
RNF40O75150 AL136982.6-201ENST00000444180 1238 ntTSL 2 BASIC8.88□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms