Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC4.97□□□□□ -1.61
SSSCA1O60232 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SSSCA1O60232 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSSCA1O60232 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC4.97□□□□□ -1.61
SSSCA1O60232 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SSSCA1O60232 AC009303.1-201ENST00000426307 352 ntBASIC4.97□□□□□ -1.61
SSSCA1O60232 KATNBL1P2-201ENST00000433311 835 ntBASIC4.97□□□□□ -1.61
SSSCA1O60232 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SSSCA1O60232 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC4.97□□□□□ -1.61
SSSCA1O60232 RN7SL223P-201ENST00000470401 294 ntBASIC4.97□□□□□ -1.61
SSSCA1O60232 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC4.97□□□□□ -1.61
SSSCA1O60232 RPL24-206ENST00000495401 478 ntTSL 2 BASIC4.97□□□□□ -1.61
SSSCA1O60232 TOMM22P4-201ENST00000511318 336 ntBASIC4.97□□□□□ -1.61
SSSCA1O60232 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.97□□□□□ -1.61
SSSCA1O60232 snoU109.5-201ENST00000516231 132 ntBASIC4.97□□□□□ -1.61
SSSCA1O60232 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC4.97□□□□□ -1.61
SSSCA1O60232 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC4.97□□□□□ -1.61
SSSCA1O60232 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSSCA1O60232 AP006437.1-202ENST00000530327 933 ntBASIC4.97□□□□□ -1.61
SSSCA1O60232 LDHC-205ENST00000537486 583 ntTSL 5 BASIC4.97□□□□□ -1.61
SSSCA1O60232 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC4.97□□□□□ -1.61
SSSCA1O60232 AC023310.2-201ENST00000553844 547 ntBASIC4.97□□□□□ -1.61
SSSCA1O60232 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC4.97□□□□□ -1.61
SSSCA1O60232 RNU4ATAC-201ENST00000580972 127 ntBASIC4.97□□□□□ -1.61
SSSCA1O60232 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC4.97□□□□□ -1.61
SSSCA1O60232 AL360169.2-201ENST00000619713 561 ntTSL 5 BASIC4.97□□□□□ -1.61
SSSCA1O60232 AL137067.2-201ENST00000621202 131 ntBASIC4.97□□□□□ -1.61
SSSCA1O60232 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SSSCA1O60232 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSSCA1O60232 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SSSCA1O60232 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSSCA1O60232 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSSCA1O60232 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
SSSCA1O60232 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.97□□□□□ -1.61
SSSCA1O60232 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSSCA1O60232 AC018765.1-201ENST00000623357 3446 ntBASIC4.97□□□□□ -1.61
SSSCA1O60232 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSSCA1O60232 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC4.97□□□□□ -1.61
SSSCA1O60232 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSSCA1O60232 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
SSSCA1O60232 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SSSCA1O60232 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SSSCA1O60232 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC4.96□□□□□ -1.61
SSSCA1O60232 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
SSSCA1O60232 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SSSCA1O60232 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SSSCA1O60232 C14orf177-201ENST00000325812 1284 ntAPPRIS P2 TSL 2 BASIC4.96□□□□□ -1.62
SSSCA1O60232 RNA5SP140-201ENST00000364524 92 ntBASIC4.96□□□□□ -1.62
SSSCA1O60232 RGS5-202ENST00000367903 934 ntTSL 3 BASIC4.96□□□□□ -1.62
SSSCA1O60232 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SSSCA1O60232 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SSSCA1O60232 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SSSCA1O60232 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC4.96□□□□□ -1.62
SSSCA1O60232 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC4.96□□□□□ -1.62
SSSCA1O60232 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC4.96□□□□□ -1.62
SSSCA1O60232 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC4.96□□□□□ -1.62
SSSCA1O60232 PHBP4-201ENST00000437447 837 ntBASIC4.96□□□□□ -1.62
SSSCA1O60232 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC4.96□□□□□ -1.62
SSSCA1O60232 RPL6P24-201ENST00000445338 864 ntBASIC4.96□□□□□ -1.62
SSSCA1O60232 MORF4-201ENST00000447135 971 ntBASIC4.96□□□□□ -1.62
SSSCA1O60232 AC092421.1-201ENST00000448148 418 ntBASIC4.96□□□□□ -1.62
SSSCA1O60232 PRELID1P3-201ENST00000450055 643 ntBASIC4.96□□□□□ -1.62
SSSCA1O60232 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC4.96□□□□□ -1.62
SSSCA1O60232 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC4.96□□□□□ -1.62
SSSCA1O60232 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC4.96□□□□□ -1.62
SSSCA1O60232 LDHC-203ENST00000535809 757 ntTSL 5 BASIC4.96□□□□□ -1.62
SSSCA1O60232 LDHC-204ENST00000536880 957 ntTSL 5 BASIC4.96□□□□□ -1.62
SSSCA1O60232 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.96□□□□□ -1.62
SSSCA1O60232 NF1P12-201ENST00000549593 583 ntBASIC4.96□□□□□ -1.62
SSSCA1O60232 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SSSCA1O60232 AC026956.1-201ENST00000558741 396 ntBASIC4.96□□□□□ -1.62
SSSCA1O60232 AC023968.1-201ENST00000560719 475 ntBASIC4.96□□□□□ -1.62
SSSCA1O60232 HNRNPA1P74-201ENST00000560782 835 ntBASIC4.96□□□□□ -1.62
SSSCA1O60232 AC010542.3-202ENST00000561728 701 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
SSSCA1O60232 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
SSSCA1O60232 MIR4685-201ENST00000578185 69 ntBASIC4.96□□□□□ -1.62
SSSCA1O60232 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.96□□□□□ -1.62
SSSCA1O60232 AC005332.4-201ENST00000592752 579 ntBASIC4.96□□□□□ -1.62
SSSCA1O60232 RPS11-205ENST00000599561 430 ntTSL 5 BASIC4.96□□□□□ -1.62
SSSCA1O60232 AC005514.1-201ENST00000623521 208 ntBASIC4.96□□□□□ -1.62
SSSCA1O60232 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.96□□□□□ -1.62
SSSCA1O60232 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC4.96□□□□□ -1.62
SSSCA1O60232 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SSSCA1O60232 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC4.96□□□□□ -1.62
SSSCA1O60232 AL136984.1-201ENST00000607611 1893 ntBASIC4.96□□□□□ -1.62
SSSCA1O60232 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SSSCA1O60232 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC4.96□□□□□ -1.62
SSSCA1O60232 AC005702.3-201ENST00000585345 1447 ntBASIC4.96□□□□□ -1.62
SSSCA1O60232 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
SSSCA1O60232 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC4.96□□□□□ -1.62
SSSCA1O60232 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSSCA1O60232 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC4.95□□□□□ -1.62
SSSCA1O60232 AC027279.4-201ENST00000624371 2072 ntBASIC4.95□□□□□ -1.62
SSSCA1O60232 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC4.95□□□□□ -1.62
SSSCA1O60232 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC4.95□□□□□ -1.62
SSSCA1O60232 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.95□□□□□ -1.62
SSSCA1O60232 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
SSSCA1O60232 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSSCA1O60232 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SSSCA1O60232 RNA5SP453-201ENST00000362503 119 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms