Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 RN7SL547P-201ENST00000490793 290 ntBASIC10.62□□□□□ -0.71
CUX2O14529 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC10.62□□□□□ -0.71
CUX2O14529 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC10.62□□□□□ -0.71
CUX2O14529 AC096996.1-201ENST00000563813 325 ntBASIC10.62□□□□□ -0.71
CUX2O14529 MIR4646-201ENST00000580775 63 ntBASIC10.62□□□□□ -0.71
CUX2O14529 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC10.62□□□□□ -0.71
CUX2O14529 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CUX2O14529 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC10.62□□□□□ -0.71
CUX2O14529 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CUX2O14529 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CUX2O14529 MAPK10-344ENST00000641718 3746 ntBASIC10.62□□□□□ -0.71
CUX2O14529 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CUX2O14529 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
CUX2O14529 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
CUX2O14529 AC009166.2-201ENST00000624410 2833 ntBASIC10.62□□□□□ -0.71
CUX2O14529 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CUX2O14529 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CUX2O14529 AC013442.1-201ENST00000397347 228 ntBASIC10.61□□□□□ -0.71
CUX2O14529 RNA5SP156-201ENST00000410250 110 ntBASIC10.61□□□□□ -0.71
CUX2O14529 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC10.61□□□□□ -0.71
CUX2O14529 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC10.61□□□□□ -0.71
CUX2O14529 Z84478.1-201ENST00000438230 1219 ntBASIC10.61□□□□□ -0.71
CUX2O14529 OR13C1P-201ENST00000457612 963 ntBASIC10.61□□□□□ -0.71
CUX2O14529 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC10.61□□□□□ -0.71
CUX2O14529 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CUX2O14529 MINCR-206ENST00000524335 499 ntTSL 2 BASIC10.61□□□□□ -0.71
CUX2O14529 AC021269.1-201ENST00000526860 705 ntBASIC10.61□□□□□ -0.71
CUX2O14529 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CUX2O14529 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CUX2O14529 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CUX2O14529 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
CUX2O14529 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CUX2O14529 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC10.61□□□□□ -0.71
CUX2O14529 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CUX2O14529 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
CUX2O14529 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CUX2O14529 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC10.61□□□□□ -0.71
CUX2O14529 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
CUX2O14529 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CUX2O14529 AC073065.1-201ENST00000411678 2866 ntBASIC10.61□□□□□ -0.71
CUX2O14529 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CUX2O14529 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CUX2O14529 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
CUX2O14529 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC10.61□□□□□ -0.71
CUX2O14529 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CUX2O14529 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC10.61□□□□□ -0.71
CUX2O14529 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC10.61□□□□□ -0.71
CUX2O14529 RN7SL72P-201ENST00000460697 269 ntBASIC10.61□□□□□ -0.71
CUX2O14529 RPS23P6-201ENST00000466136 431 ntBASIC10.61□□□□□ -0.71
CUX2O14529 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC10.61□□□□□ -0.71
CUX2O14529 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CUX2O14529 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CUX2O14529 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC10.61□□□□□ -0.71
CUX2O14529 RN7SL544P-201ENST00000617232 284 ntBASIC10.61□□□□□ -0.71
CUX2O14529 MIR6837-201ENST00000620884 64 ntBASIC10.61□□□□□ -0.71
CUX2O14529 RN7SL763P-201ENST00000620922 284 ntBASIC10.61□□□□□ -0.71
CUX2O14529 AP000346.3-201ENST00000622821 210 ntBASIC10.61□□□□□ -0.71
CUX2O14529 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC10.61□□□□□ -0.71
CUX2O14529 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
CUX2O14529 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
CUX2O14529 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
CUX2O14529 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CUX2O14529 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
CUX2O14529 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CUX2O14529 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CUX2O14529 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
CUX2O14529 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
CUX2O14529 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
CUX2O14529 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC10.6□□□□□ -0.71
CUX2O14529 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CUX2O14529 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CUX2O14529 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC10.6□□□□□ -0.71
CUX2O14529 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC10.6□□□□□ -0.71
CUX2O14529 LRRC37A14P-201ENST00000452297 462 ntBASIC10.6□□□□□ -0.71
CUX2O14529 AC079841.1-201ENST00000481228 950 ntBASIC10.6□□□□□ -0.71
CUX2O14529 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CUX2O14529 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC10.6□□□□□ -0.71
CUX2O14529 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CUX2O14529 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC10.6□□□□□ -0.71
CUX2O14529 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CUX2O14529 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CUX2O14529 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC10.6□□□□□ -0.71
CUX2O14529 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CUX2O14529 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CUX2O14529 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC10.59□□□□□ -0.71
CUX2O14529 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC10.59□□□□□ -0.71
CUX2O14529 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
CUX2O14529 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
CUX2O14529 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC10.59□□□□□ -0.71
CUX2O14529 AL023806.3-201ENST00000638502 2704 ntBASIC10.59□□□□□ -0.71
CUX2O14529 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CUX2O14529 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC10.59□□□□□ -0.71
CUX2O14529 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CUX2O14529 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
CUX2O14529 AC010132.2-201ENST00000295493 1043 ntBASIC10.59□□□□□ -0.71
CUX2O14529 GAS5-202ENST00000414075 413 ntTSL 2 BASIC10.59□□□□□ -0.71
CUX2O14529 CYCSP52-201ENST00000422857 310 ntBASIC10.59□□□□□ -0.71
CUX2O14529 RPS23P9-201ENST00000448848 438 ntBASIC10.59□□□□□ -0.71
CUX2O14529 TPT1P13-201ENST00000449760 499 ntBASIC10.59□□□□□ -0.71
CUX2O14529 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms