Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AL031651.1-201ENST00000615357 1438 ntBASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 RPL31P11-201ENST00000426558 1558 ntBASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 AC024341.1-201ENST00000526444 1552 ntBASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 AL359976.1-201ENST00000418655 3528 ntBASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 CASC19-246ENST00000641625 1606 ntBASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 AL136531.3-201ENST00000624378 3658 ntBASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 RNU6-670P-201ENST00000364312 104 ntBASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 OR7E156P-201ENST00000400303 464 ntBASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 AL590623.1-201ENST00000427864 105 ntBASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 HMGB1P7-201ENST00000450921 612 ntBASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 AC026254.2-201ENST00000475295 371 ntBASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 ATG10-AS1-201ENST00000504846 648 ntBASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 OR8K2P-201ENST00000524645 927 ntBASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 AC021269.1-201ENST00000526860 705 ntBASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 AC079315.1-201ENST00000602952 623 ntBASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 AC020978.9-201ENST00000624380 1141 ntBASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 CASC19-228ENST00000641414 1684 ntBASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 AC110597.1-201ENST00000562669 3176 ntBASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.48□□□□□ -1.37
TBC1D3FA6NER0 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 AL359694.2-201ENST00000567753 1615 ntBASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 ASNSP6-201ENST00000592770 1618 ntBASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 STAG3L4-201ENST00000352103 530 ntBASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 GCNT1P4-201ENST00000404096 329 ntBASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 MIR1282-201ENST00000408865 101 ntBASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 RNA5SP198-201ENST00000410376 127 ntBASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 RNU2-72P-201ENST00000411175 163 ntBASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 RPL21P50-201ENST00000417698 477 ntBASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 GTF2IP14-201ENST00000441415 586 ntBASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 AC011742.2-201ENST00000443818 352 ntBASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 RNU7-157P-201ENST00000459600 66 ntBASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 RN7SL254P-201ENST00000460609 284 ntBASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 OR2A3P-201ENST00000493774 953 ntBASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 NDUFA5P11-201ENST00000567995 343 ntBASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 AC002310.3-201ENST00000569728 723 ntBASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.47□□□□□ -1.37
TBC1D3FA6NER0 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms