Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 SAGE3P-201ENST00000619800 1635 ntBASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 ARSFP1-201ENST00000398758 477 ntBASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 RPS19P6-201ENST00000441327 433 ntBASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 GAPDHP37-201ENST00000442317 968 ntBASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 AL445991.1-201ENST00000450381 475 ntBASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 CCNJP2-201ENST00000457810 1163 ntBASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 IGKV1D-22-201ENST00000518953 324 ntBASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 OR5D2P-201ENST00000524390 911 ntBASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 OR9G2P-201ENST00000533326 880 ntBASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 MIR6774-201ENST00000614651 70 ntBASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 MIR6503-201ENST00000622884 86 ntBASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 USP46-202ENST00000451218 4622 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 AL355834.1-201ENST00000556602 3965 ntBASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 FANCD2P2-201ENST00000437591 1400 ntBASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 AC123769.1-201ENST00000530992 3192 ntBASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 CREM-203ENST00000344351 1625 ntTSL 2 BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 RPL31P11-201ENST00000426558 1558 ntBASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 OR7A2P-201ENST00000304105 930 ntBASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 NPM1P37-201ENST00000403105 874 ntBASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 RN7SKP221-201ENST00000410420 301 ntBASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 AC009506.2-201ENST00000420635 840 ntBASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 AL022324.2-201ENST00000434827 780 ntBASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 PPIAP32-201ENST00000449940 472 ntBASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 SNX18P26-201ENST00000458433 740 ntBASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 RN7SL413P-201ENST00000482700 297 ntBASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 NPM1P27-201ENST00000502784 830 ntBASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 AC106800.3-201ENST00000511389 308 ntBASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 AC097486.1-201ENST00000515331 210 ntBASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 RNU2-45P-201ENST00000516068 187 ntBASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 AC023968.1-201ENST00000560719 475 ntBASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 SETP3-201ENST00000581726 813 ntBASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 AC233702.7-202ENST00000582941 211 ntBASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DRB4X5D2U9 AL390877.1-201ENST00000605704 214 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 218.8 ms