Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 PRR13P4-201ENST00000577786 421 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 LINC01483-205ENST00000591334 620 ntTSL 4 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 DMKN-268ENST00000602781 827 ntAPPRIS ALT2 TSL 3 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AC007038.2-201ENST00000608095 740 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AC006566.1-201ENST00000608943 513 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 SNORD91A-202ENST00000609620 191 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AC006238.1-201ENST00000609787 534 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 7SK.12-201ENST00000612820 244 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 SCOC-AS1-201ENST00000512692 1987 ntTSL 2 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 TIMD4-201ENST00000274532 1369 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 ZC3H14-203ENST00000318308 1384 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AC010132.4-201ENST00000569883 1368 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 ALDOB-203ENST00000616752 1391 ntTSL 5 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AF131215.2-201ENST00000531549 1710 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 NF1P2-201ENST00000556855 2505 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 KLRC1-203ENST00000408006 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 MAPK10-333ENST00000641607 2481 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AC018992.1-201ENST00000523778 2149 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AL079343.1-201ENST00000572358 1771 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 HSP90AB2P-201ENST00000507090 2176 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 OR9G4-201ENST00000302957 984 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 OR9K2-201ENST00000305377 1122 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 OR7A17-201ENST00000327462 1127 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 BTF3-201ENST00000335895 897 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 FXYD1-201ENST00000351325 592 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 BEND6-201ENST00000370745 579 ntTSL 5 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 RACK1-201ENST00000376817 965 ntTSL 5 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 CST11-201ENST00000377007 461 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 SNORA30-201ENST00000384028 129 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 Y_RNA.554-201ENST00000384672 102 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 TRBV5-1-201ENST00000390381 652 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 RNU2-41P-201ENST00000410991 178 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 OR13D3P-201ENST00000412501 937 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 USP9YP6-201ENST00000413550 854 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 OR51A5P-201ENST00000415429 942 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 RPL21P32-201ENST00000419877 477 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AL390840.1-201ENST00000420303 988 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AC011747.1-201ENST00000425678 565 ntTSL 4 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AL606534.2-201ENST00000436756 624 ntTSL 5 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 PA2G4P6-201ENST00000438325 1197 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 DNAJC19P4-201ENST00000440115 345 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AL353754.1-201ENST00000440219 340 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AL359711.1-201ENST00000441999 123 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 BX005266.3-201ENST00000443013 1075 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AL157714.2-204ENST00000452283 973 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 USP9YP34-201ENST00000453983 808 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 RN7SL854P-201ENST00000459767 295 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 DAP3-209ENST00000465375 729 ntTSL 2 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AL121769.1-201ENST00000469473 401 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 RN7SL403P-201ENST00000481783 305 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 GAPDHP39-201ENST00000481866 979 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AC018695.1-201ENST00000484096 664 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AC009269.1-202ENST00000484381 469 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 PAQR9-AS1-202ENST00000493825 576 ntTSL 2 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 HSD3BP4-201ENST00000511509 1120 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AC068898.2-201ENST00000514425 597 ntTSL 4 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AC090835.1-201ENST00000515189 1024 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 RNA5SP287-201ENST00000516358 103 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 RNA5SP460-201ENST00000516789 100 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 TMEM269-202ENST00000536543 983 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AC048344.2-201ENST00000547280 147 ntBASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AL355922.4-201ENST00000555642 449 ntTSL 3 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC7.79□□□□□ -1.16
PCDHGA11Q9Y5H2 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms