Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 GTF2IP4-201ENST00000453092 2054 ntBASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 AC092692.1-201ENST00000623625 2595 ntBASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 SNORA7A-201ENST00000384765 139 ntBASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 AL360271.1-201ENST00000395679 510 ntBASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 AL589794.1-201ENST00000424971 390 ntBASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 AC092106.2-201ENST00000436597 487 ntBASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 HMGN1P32-201ENST00000441744 256 ntBASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 AL022237.1-201ENST00000446663 358 ntBASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 RPS27AP3-201ENST00000453803 454 ntBASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 AC103563.5-201ENST00000455643 364 ntBASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 SLC25A51P1-201ENST00000468432 871 ntBASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 AC012123.2-201ENST00000485809 248 ntBASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 RPL5P33-201ENST00000487833 905 ntBASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 AC122714.1-201ENST00000502510 459 ntBASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 AC093325.1-201ENST00000508378 326 ntBASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 MINOS1P4-201ENST00000515470 318 ntBASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 RN7SKP248-201ENST00000516278 305 ntBASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 CHEK2P2-201ENST00000554701 672 ntBASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 AC125494.2-201ENST00000602431 657 ntBASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 AC012175.1-201ENST00000603755 531 ntBASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 AC114477.1-201ENST00000605097 605 ntBASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 AC019257.2-201ENST00000605539 497 ntBASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 MIR6070-201ENST00000613967 103 ntBASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 MIR6883-201ENST00000614952 78 ntBASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 AC022726.2-201ENST00000634673 547 ntBASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 DDX18P6-201ENST00000450119 1997 ntBASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 FANCD2P2-201ENST00000437591 1400 ntBASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 SAGE3P-201ENST00000619800 1635 ntBASIC5.56□□□□□ -1.52
RHBDD3Q9Y3P4 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 MRPS6P2-201ENST00000381143 370 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms