Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 FUNDC2P3-201ENST00000334716 533 ntBASIC7.83□□□□□ -1.16
SCN11AQ9UI33 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.83□□□□□ -1.16
SCN11AQ9UI33 BMS1P17-202ENST00000416720 316 ntBASIC7.83□□□□□ -1.16
SCN11AQ9UI33 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC7.83□□□□□ -1.16
SCN11AQ9UI33 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC7.83□□□□□ -1.16
SCN11AQ9UI33 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.83□□□□□ -1.16
SCN11AQ9UI33 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7.83□□□□□ -1.16
SCN11AQ9UI33 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.83□□□□□ -1.16
SCN11AQ9UI33 LECT2-205ENST00000522943 574 ntTSL 3 BASIC7.83□□□□□ -1.16
SCN11AQ9UI33 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SCN11AQ9UI33 HMGN2P36-201ENST00000529541 409 ntBASIC7.83□□□□□ -1.16
SCN11AQ9UI33 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
SCN11AQ9UI33 MIR6719-201ENST00000622428 87 ntBASIC7.83□□□□□ -1.16
SCN11AQ9UI33 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
SCN11AQ9UI33 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SCN11AQ9UI33 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.83□□□□□ -1.16
SCN11AQ9UI33 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SCN11AQ9UI33 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.83□□□□□ -1.16
SCN11AQ9UI33 AP002833.3-201ENST00000625075 2265 ntBASIC7.83□□□□□ -1.16
SCN11AQ9UI33 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SCN11AQ9UI33 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
SCN11AQ9UI33 AL079307.1-201ENST00000553312 5982 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SCN11AQ9UI33 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SCN11AQ9UI33 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC7.82□□□□□ -1.16
SCN11AQ9UI33 RPL34P3-201ENST00000421454 338 ntBASIC7.82□□□□□ -1.16
SCN11AQ9UI33 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC7.82□□□□□ -1.16
SCN11AQ9UI33 VN1R110P-201ENST00000438988 971 ntBASIC7.82□□□□□ -1.16
SCN11AQ9UI33 AC006539.1-201ENST00000481419 501 ntBASIC7.82□□□□□ -1.16
SCN11AQ9UI33 AC008429.4-201ENST00000521201 182 ntBASIC7.82□□□□□ -1.16
SCN11AQ9UI33 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC7.82□□□□□ -1.16
SCN11AQ9UI33 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC7.82□□□□□ -1.16
SCN11AQ9UI33 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC7.82□□□□□ -1.16
SCN11AQ9UI33 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC7.82□□□□□ -1.16
SCN11AQ9UI33 MAPK10-365ENST00000641902 3825 ntBASIC7.82□□□□□ -1.16
SCN11AQ9UI33 AC079776.5-201ENST00000641920 211 ntBASIC7.82□□□□□ -1.16
SCN11AQ9UI33 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.82□□□□□ -1.16
SCN11AQ9UI33 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SCN11AQ9UI33 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
SCN11AQ9UI33 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SCN11AQ9UI33 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SCN11AQ9UI33 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC7.82□□□□□ -1.16
SCN11AQ9UI33 NEPNP-201ENST00000404786 1371 ntBASIC7.82□□□□□ -1.16
SCN11AQ9UI33 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SCN11AQ9UI33 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.82□□□□□ -1.16
SCN11AQ9UI33 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SCN11AQ9UI33 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.82□□□□□ -1.16
SCN11AQ9UI33 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SCN11AQ9UI33 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SCN11AQ9UI33 SNORA58B-201ENST00000364259 136 ntBASIC7.82□□□□□ -1.16
SCN11AQ9UI33 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
SCN11AQ9UI33 RN7SL629P-201ENST00000489622 285 ntBASIC7.82□□□□□ -1.16
SCN11AQ9UI33 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.82□□□□□ -1.16
SCN11AQ9UI33 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC7.82□□□□□ -1.16
SCN11AQ9UI33 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.82□□□□□ -1.16
SCN11AQ9UI33 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC7.82□□□□□ -1.16
SCN11AQ9UI33 AC119403.2-201ENST00000590960 598 ntBASIC7.82□□□□□ -1.16
SCN11AQ9UI33 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC7.82□□□□□ -1.16
SCN11AQ9UI33 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
SCN11AQ9UI33 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SCN11AQ9UI33 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.81□□□□□ -1.16
SCN11AQ9UI33 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
SCN11AQ9UI33 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
SCN11AQ9UI33 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC7.81□□□□□ -1.16
SCN11AQ9UI33 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
SCN11AQ9UI33 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.81□□□□□ -1.16
SCN11AQ9UI33 CDY5P-201ENST00000411487 1580 ntBASIC7.81□□□□□ -1.16
SCN11AQ9UI33 CDY9P-201ENST00000451397 1580 ntBASIC7.81□□□□□ -1.16
SCN11AQ9UI33 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SCN11AQ9UI33 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC7.81□□□□□ -1.16
SCN11AQ9UI33 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SCN11AQ9UI33 RNA5SP46-201ENST00000362370 120 ntBASIC7.81□□□□□ -1.16
SCN11AQ9UI33 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
SCN11AQ9UI33 AL445928.1-201ENST00000435545 222 ntBASIC7.81□□□□□ -1.16
SCN11AQ9UI33 AC008629.2-201ENST00000503783 483 ntBASIC7.81□□□□□ -1.16
SCN11AQ9UI33 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.81□□□□□ -1.16
SCN11AQ9UI33 MIR4700-201ENST00000578311 74 ntBASIC7.81□□□□□ -1.16
SCN11AQ9UI33 AC005244.1-201ENST00000582566 339 ntBASIC7.81□□□□□ -1.16
SCN11AQ9UI33 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SCN11AQ9UI33 AC127024.6-201ENST00000621598 424 ntBASIC7.81□□□□□ -1.16
SCN11AQ9UI33 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
SCN11AQ9UI33 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
SCN11AQ9UI33 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
SCN11AQ9UI33 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 AC005618.1-201ENST00000606901 3148 ntBASIC7.8□□□□□ -1.16
SCN11AQ9UI33 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
SCN11AQ9UI33 MIR375-201ENST00000362103 64 ntBASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms