Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 NOTCH2-201ENST00000256646 11389 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
RIMBP3Q9UFD9 DIP2A-202ENST00000417564 6967 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 RNA5SP479-201ENST00000364858 117 ntBASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 AL590139.1-201ENST00000416267 400 ntBASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 AC234781.3-201ENST00000452540 973 ntBASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 RPS3AP53-201ENST00000454716 778 ntBASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 RPEP1-201ENST00000504507 658 ntBASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 AC009120.3-201ENST00000563335 499 ntBASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 CLNK-201ENST00000226951 5599 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 ZHX3-214ENST00000559234 6296 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 CECR2-206ENST00000612582 9645 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 RBM27-201ENST00000265271 6451 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 RNU1-46P-201ENST00000384425 164 ntBASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 RN7SKP166-201ENST00000410812 305 ntBASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 ANKRD54P1-201ENST00000433115 471 ntBASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 RPS18P6-201ENST00000476880 458 ntBASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 HPRT1P1-201ENST00000509498 657 ntBASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 TNIK-211ENST00000475336 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
RIMBP3Q9UFD9 AC087516.1-201ENST00000561236 2428 ntBASIC9.55□□□□□ -0.88
RIMBP3Q9UFD9 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC9.55□□□□□ -0.88
RIMBP3Q9UFD9 EPHB2-204ENST00000400191 10816 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
RIMBP3Q9UFD9 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
RIMBP3Q9UFD9 DZIP1-202ENST00000361156 7011 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
RIMBP3Q9UFD9 EEF1A1P30-201ENST00000429708 1315 ntBASIC9.55□□□□□ -0.88
RIMBP3Q9UFD9 AC009166.2-201ENST00000624410 2833 ntBASIC9.55□□□□□ -0.88
RIMBP3Q9UFD9 RMST-210ENST00000640149 2844 ntTSL 5 BASIC9.55□□□□□ -0.88
RIMBP3Q9UFD9 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
RIMBP3Q9UFD9 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
RIMBP3Q9UFD9 SORBS2-204ENST00000355634 4622 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
RIMBP3Q9UFD9 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
RIMBP3Q9UFD9 AL359396.1-201ENST00000623151 2376 ntBASIC9.55□□□□□ -0.88
RIMBP3Q9UFD9 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC9.55□□□□□ -0.88
RIMBP3Q9UFD9 RN7SKP29-201ENST00000410957 272 ntBASIC9.55□□□□□ -0.88
RIMBP3Q9UFD9 AC007064.3-201ENST00000422608 359 ntBASIC9.55□□□□□ -0.88
RIMBP3Q9UFD9 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC9.55□□□□□ -0.88
RIMBP3Q9UFD9 AL138878.2-201ENST00000440581 1241 ntBASIC9.55□□□□□ -0.88
RIMBP3Q9UFD9 RPL7L1P11-201ENST00000446092 721 ntBASIC9.55□□□□□ -0.88
RIMBP3Q9UFD9 RPL7AP28-201ENST00000464513 571 ntBASIC9.55□□□□□ -0.88
RIMBP3Q9UFD9 AC109462.1-201ENST00000491087 368 ntBASIC9.55□□□□□ -0.88
RIMBP3Q9UFD9 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC9.55□□□□□ -0.88
RIMBP3Q9UFD9 OR7A1P-202ENST00000641542 1158 ntBASIC9.55□□□□□ -0.88
RIMBP3Q9UFD9 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC9.55□□□□□ -0.88
RIMBP3Q9UFD9 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
RIMBP3Q9UFD9 KIF1B-212ENST00000622724 8588 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
RIMBP3Q9UFD9 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC9.55□□□□□ -0.88
RIMBP3Q9UFD9 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC9.55□□□□□ -0.88
RIMBP3Q9UFD9 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
RIMBP3Q9UFD9 AL353763.2-201ENST00000623489 1903 ntBASIC9.55□□□□□ -0.88
RIMBP3Q9UFD9 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
RIMBP3Q9UFD9 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC9.54□□□□□ -0.88
RIMBP3Q9UFD9 AC007842.1-201ENST00000597336 2039 ntBASIC9.54□□□□□ -0.88
RIMBP3Q9UFD9 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC9.54□□□□□ -0.88
RIMBP3Q9UFD9 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC9.54□□□□□ -0.88
RIMBP3Q9UFD9 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
RIMBP3Q9UFD9 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
RIMBP3Q9UFD9 AC137056.2-201ENST00000624055 1958 ntBASIC9.54□□□□□ -0.88
RIMBP3Q9UFD9 MRE11P1-201ENST00000464884 2127 ntBASIC9.54□□□□□ -0.88
RIMBP3Q9UFD9 NUDCD1-201ENST00000239690 4217 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
RIMBP3Q9UFD9 FANCM-202ENST00000542564 6167 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
RIMBP3Q9UFD9 EIF5B-201ENST00000289371 5777 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
RIMBP3Q9UFD9 NMD3P2-201ENST00000421815 761 ntBASIC9.54□□□□□ -0.88
RIMBP3Q9UFD9 AL133173.1-201ENST00000423458 397 ntBASIC9.54□□□□□ -0.88
RIMBP3Q9UFD9 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC9.54□□□□□ -0.88
RIMBP3Q9UFD9 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC9.54□□□□□ -0.88
RIMBP3Q9UFD9 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC9.54□□□□□ -0.88
RIMBP3Q9UFD9 AL137067.2-201ENST00000621202 131 ntBASIC9.54□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms