Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 MIR1275-201ENST00000408770 80 ntBASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 AL139158.1-201ENST00000424719 340 ntBASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 GAPDHP37-201ENST00000442317 968 ntBASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 AC068491.1-201ENST00000449539 1241 ntBASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 OR7E22P-201ENST00000478335 1035 ntBASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 ABCA11P-202ENST00000504019 2110 ntBASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 GAPDHP41-201ENST00000613707 975 ntBASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 AC068213.1-201ENST00000625124 226 ntBASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 AP001052.1-201ENST00000626421 99 ntBASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC7.53□□□□□ -1.2
UPF3BQ9BZI7 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.52□□□□□ -1.2
UPF3BQ9BZI7 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
UPF3BQ9BZI7 AC093829.1-201ENST00000506662 1618 ntBASIC7.52□□□□□ -1.2
UPF3BQ9BZI7 AC005725.1-201ENST00000577346 2607 ntBASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 SNORD16-201ENST00000362803 99 ntBASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 LCN1P2-201ENST00000372030 223 ntBASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 RPS17P17-201ENST00000419392 409 ntBASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 NAP1L4P2-201ENST00000425958 899 ntBASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 AC027229.1-201ENST00000583887 253 ntBASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 AL589863.1-201ENST00000595383 631 ntBASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 AC015982.1-201ENST00000608113 465 ntBASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 AC097641.3-201ENST00000613523 464 ntBASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 AL359742.1-201ENST00000622497 540 ntBASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 UOX-205ENST00000640983 544 ntTSL 4 BASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 AP001541.1-201ENST00000623322 1904 ntBASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.52□□□□□ -1.21
UPF3BQ9BZI7 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.51□□□□□ -1.21
UPF3BQ9BZI7 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
UPF3BQ9BZI7 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC7.51□□□□□ -1.21
UPF3BQ9BZI7 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
UPF3BQ9BZI7 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
UPF3BQ9BZI7 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
UPF3BQ9BZI7 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
UPF3BQ9BZI7 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC7.51□□□□□ -1.21
UPF3BQ9BZI7 RNA5SP85-201ENST00000365378 119 ntBASIC7.51□□□□□ -1.21
UPF3BQ9BZI7 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
UPF3BQ9BZI7 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.51□□□□□ -1.21
UPF3BQ9BZI7 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC7.51□□□□□ -1.21
UPF3BQ9BZI7 AL022319.1-201ENST00000458183 1167 ntBASIC7.51□□□□□ -1.21
UPF3BQ9BZI7 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.51□□□□□ -1.21
UPF3BQ9BZI7 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.51□□□□□ -1.21
UPF3BQ9BZI7 RPS27P20-201ENST00000492051 246 ntBASIC7.51□□□□□ -1.21
UPF3BQ9BZI7 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC7.51□□□□□ -1.21
UPF3BQ9BZI7 AC002456.2-201ENST00000509356 380 ntBASIC7.51□□□□□ -1.21
UPF3BQ9BZI7 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
UPF3BQ9BZI7 AC026826.3-201ENST00000561747 158 ntBASIC7.51□□□□□ -1.21
UPF3BQ9BZI7 SYPL1P2-201ENST00000582878 727 ntBASIC7.51□□□□□ -1.21
UPF3BQ9BZI7 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms