Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 AL121579.2-201ENST00000555466 590 ntBASIC9.35□□□□□ -0.91
SCAPERQ9BY12 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 AL953862.2-201ENST00000603089 820 ntBASIC9.35□□□□□ -0.91
SCAPERQ9BY12 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 AL136981.1-203ENST00000451452 3844 ntBASIC9.35□□□□□ -0.91
SCAPERQ9BY12 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SCAPERQ9BY12 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SCAPERQ9BY12 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC9.34□□□□□ -0.91
SCAPERQ9BY12 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
SCAPERQ9BY12 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SCAPERQ9BY12 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC9.34□□□□□ -0.91
SCAPERQ9BY12 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SCAPERQ9BY12 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SCAPERQ9BY12 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SCAPERQ9BY12 RNU6-171P-201ENST00000384354 107 ntBASIC9.34□□□□□ -0.91
SCAPERQ9BY12 RPL34P3-201ENST00000421454 338 ntBASIC9.34□□□□□ -0.91
SCAPERQ9BY12 AC127526.2-201ENST00000426436 775 ntBASIC9.34□□□□□ -0.91
SCAPERQ9BY12 AC002504.1-201ENST00000438281 691 ntBASIC9.34□□□□□ -0.91
SCAPERQ9BY12 GAPDHP23-201ENST00000444823 993 ntBASIC9.34□□□□□ -0.91
SCAPERQ9BY12 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SCAPERQ9BY12 AL139156.3-201ENST00000454802 394 ntBASIC9.34□□□□□ -0.91
SCAPERQ9BY12 RANP2-201ENST00000456833 229 ntBASIC9.34□□□□□ -0.91
SCAPERQ9BY12 AC091965.3-201ENST00000506236 208 ntBASIC9.34□□□□□ -0.91
SCAPERQ9BY12 AP005639.1-201ENST00000526939 192 ntBASIC9.34□□□□□ -0.91
SCAPERQ9BY12 PCNAP4-201ENST00000532690 730 ntBASIC9.34□□□□□ -0.91
SCAPERQ9BY12 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC9.34□□□□□ -0.91
SCAPERQ9BY12 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC9.34□□□□□ -0.91
SCAPERQ9BY12 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC9.34□□□□□ -0.91
SCAPERQ9BY12 LARS-212ENST00000510191 3737 ntTSL 2 BASIC9.34□□□□□ -0.91
SCAPERQ9BY12 AC079777.1-201ENST00000623836 1953 ntBASIC9.34□□□□□ -0.91
SCAPERQ9BY12 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SCAPERQ9BY12 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC9.34□□□□□ -0.91
SCAPERQ9BY12 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SCAPERQ9BY12 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SCAPERQ9BY12 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
SCAPERQ9BY12 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SCAPERQ9BY12 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.92
SCAPERQ9BY12 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC9.33□□□□□ -0.92
SCAPERQ9BY12 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
SCAPERQ9BY12 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC9.33□□□□□ -0.92
SCAPERQ9BY12 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
SCAPERQ9BY12 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
SCAPERQ9BY12 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
SCAPERQ9BY12 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC9.33□□□□□ -0.92
SCAPERQ9BY12 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC9.33□□□□□ -0.92
SCAPERQ9BY12 PTMAP6-201ENST00000439110 327 ntBASIC9.33□□□□□ -0.92
SCAPERQ9BY12 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC9.33□□□□□ -0.92
SCAPERQ9BY12 AC093270.2-201ENST00000486157 792 ntBASIC9.33□□□□□ -0.92
SCAPERQ9BY12 DUTP7-201ENST00000507982 486 ntBASIC9.33□□□□□ -0.92
SCAPERQ9BY12 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC9.33□□□□□ -0.92
SCAPERQ9BY12 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC9.33□□□□□ -0.92
SCAPERQ9BY12 IGLV2-28-201ENST00000520681 304 ntBASIC9.33□□□□□ -0.92
SCAPERQ9BY12 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC9.33□□□□□ -0.92
SCAPERQ9BY12 IGLV3-6-201ENST00000523937 250 ntBASIC9.33□□□□□ -0.92
SCAPERQ9BY12 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC9.33□□□□□ -0.92
SCAPERQ9BY12 AC015802.2-201ENST00000589690 189 ntBASIC9.33□□□□□ -0.92
SCAPERQ9BY12 AC118658.2-201ENST00000618697 459 ntBASIC9.33□□□□□ -0.92
SCAPERQ9BY12 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SCAPERQ9BY12 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC9.33□□□□□ -0.92
SCAPERQ9BY12 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC9.33□□□□□ -0.92
SCAPERQ9BY12 AL161901.1-201ENST00000624954 3425 ntBASIC9.33□□□□□ -0.92
SCAPERQ9BY12 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC9.33□□□□□ -0.92
SCAPERQ9BY12 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
SCAPERQ9BY12 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SCAPERQ9BY12 AC119674.1-202ENST00000641333 1860 ntBASIC9.33□□□□□ -0.92
SCAPERQ9BY12 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
SCAPERQ9BY12 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SCAPERQ9BY12 AC073429.2-201ENST00000569694 1444 ntBASIC9.33□□□□□ -0.92
SCAPERQ9BY12 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SCAPERQ9BY12 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC9.33□□□□□ -0.92
SCAPERQ9BY12 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
SCAPERQ9BY12 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
SCAPERQ9BY12 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC9.32□□□□□ -0.92
SCAPERQ9BY12 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SCAPERQ9BY12 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SCAPERQ9BY12 SPTLC1P2-201ENST00000407089 121 ntBASIC9.32□□□□□ -0.92
SCAPERQ9BY12 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC9.32□□□□□ -0.92
SCAPERQ9BY12 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
SCAPERQ9BY12 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC9.32□□□□□ -0.92
SCAPERQ9BY12 AC074087.1-201ENST00000512059 724 ntBASIC9.32□□□□□ -0.92
SCAPERQ9BY12 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC9.32□□□□□ -0.92
SCAPERQ9BY12 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC9.32□□□□□ -0.92
SCAPERQ9BY12 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC9.32□□□□□ -0.92
SCAPERQ9BY12 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SCAPERQ9BY12 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC9.32□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms