Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC083760.1-201ENST00000589621 670 ntBASIC6.12□□□□□ -1.43
SSBP3Q9BWW4 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SSBP3Q9BWW4 AL031985.2-201ENST00000600955 480 ntBASIC6.12□□□□□ -1.43
SSBP3Q9BWW4 AC005479.3-201ENST00000602790 431 ntBASIC6.12□□□□□ -1.43
SSBP3Q9BWW4 DUXAP11-201ENST00000603858 526 ntBASIC6.12□□□□□ -1.43
SSBP3Q9BWW4 QTRT1P1-201ENST00000604344 1078 ntBASIC6.12□□□□□ -1.43
SSBP3Q9BWW4 ANKRD36BP1-202ENST00000604892 1417 ntBASIC6.12□□□□□ -1.43
SSBP3Q9BWW4 AC012640.3-201ENST00000607847 430 ntBASIC6.12□□□□□ -1.43
SSBP3Q9BWW4 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC6.12□□□□□ -1.43
SSBP3Q9BWW4 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
SSBP3Q9BWW4 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SSBP3Q9BWW4 AC090643.1-201ENST00000623600 3100 ntBASIC6.12□□□□□ -1.43
SSBP3Q9BWW4 AC068860.1-201ENST00000623701 3736 ntBASIC6.12□□□□□ -1.43
SSBP3Q9BWW4 AC092656.1-203ENST00000624134 423 ntBASIC6.12□□□□□ -1.43
SSBP3Q9BWW4 AL121835.2-201ENST00000624253 3502 ntBASIC6.12□□□□□ -1.43
SSBP3Q9BWW4 AC007490.1-201ENST00000624321 703 ntBASIC6.12□□□□□ -1.43
SSBP3Q9BWW4 AC091965.5-201ENST00000624785 342 ntBASIC6.12□□□□□ -1.43
SSBP3Q9BWW4 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.12□□□□□ -1.43
SSBP3Q9BWW4 AL590396.3-201ENST00000636334 300 ntBASIC6.12□□□□□ -1.43
SSBP3Q9BWW4 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.12□□□□□ -1.43
SSBP3Q9BWW4 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
SSBP3Q9BWW4 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.12□□□□□ -1.43
SSBP3Q9BWW4 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.12□□□□□ -1.43
SSBP3Q9BWW4 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
SSBP3Q9BWW4 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 MFSD8-217ENST00000641178 4374 ntBASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 AC087565.3-202ENST00000642085 1603 ntBASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 AC007923.2-201ENST00000584218 1591 ntBASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 EEF1A1P5-201ENST00000436459 1389 ntBASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 OR51A10P-201ENST00000307165 937 ntBASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 AC023886.2-201ENST00000321285 411 ntBASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 SNORD116-12-201ENST00000384468 92 ntBASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 AL136310.1-201ENST00000404926 654 ntBASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 PTENP1-201ENST00000447117 1215 ntBASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 RHEBP1-201ENST00000448647 556 ntBASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 RPL7P45-201ENST00000455851 743 ntBASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 AC092691.2-201ENST00000461787 803 ntBASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 RN7SL751P-201ENST00000473281 284 ntBASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 NAA50-206ENST00000493454 964 ntTSL 2 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 RPL5P14-201ENST00000494197 878 ntBASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 RNU6-720P-201ENST00000516363 108 ntBASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 IGKV1D-32-201ENST00000517449 318 ntBASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 AC020937.1-201ENST00000519677 1013 ntBASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 HMGB1P46-201ENST00000520062 610 ntBASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 OR5G4P-201ENST00000525251 760 ntBASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 RN7SL14P-201ENST00000579715 298 ntBASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 FCGR1CP-201ENST00000579737 1127 ntBASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 AC011193.2-201ENST00000582638 367 ntBASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 AC022069.1-201ENST00000582910 658 ntBASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 AP001981.2-201ENST00000603241 418 ntBASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 AF250324.2-201ENST00000608299 610 ntBASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 AC103564.3-201ENST00000621194 220 ntBASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 AC022140.2-201ENST00000623500 188 ntBASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 FRG1DP-201ENST00000635586 771 ntBASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 THAP12P3-201ENST00000456373 2266 ntBASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 THAP12P7-201ENST00000520248 2290 ntBASIC6.11□□□□□ -1.43
SSBP3Q9BWW4 PARN-201ENST00000341484 2100 ntTSL 2 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms