Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 SAR1A-205ENST00000373242 5981 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
PHOX2BQ99453 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PHOX2BQ99453 CNTNAP4-202ENST00000377504 4723 ntTSL 5 BASIC8.6□□□□□ -1.03
PHOX2BQ99453 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PHOX2BQ99453 LINC02072-201ENST00000441895 2645 ntTSL 2 BASIC8.6□□□□□ -1.03
PHOX2BQ99453 CEP41-219ENST00000616628 3315 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PHOX2BQ99453 FAM13C-217ENST00000618804 3333 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
PHOX2BQ99453 AMPD3-208ENST00000528723 2753 ntTSL 2 BASIC8.6□□□□□ -1.03
PHOX2BQ99453 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
PHOX2BQ99453 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
PHOX2BQ99453 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
PHOX2BQ99453 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PHOX2BQ99453 USP15-202ENST00000312635 2226 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PHOX2BQ99453 GSDMC-201ENST00000276708 2714 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PHOX2BQ99453 LPAL2-205ENST00000639825 1536 ntTSL 5 BASIC8.59□□□□□ -1.03
PHOX2BQ99453 ARID2-201ENST00000334344 8642 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PHOX2BQ99453 AL590004.4-201ENST00000566733 7060 ntBASIC8.59□□□□□ -1.03
PHOX2BQ99453 MAMLD1-204ENST00000426613 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
PHOX2BQ99453 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PHOX2BQ99453 MCM3-205ENST00000596288 3169 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PHOX2BQ99453 FIGNL1-206ENST00000433017 3626 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
PHOX2BQ99453 FGB-201ENST00000302068 1975 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PHOX2BQ99453 IGSF1-205ENST00000370904 5413 ntAPPRIS ALT2 TSL 2 BASIC8.59□□□□□ -1.03
PHOX2BQ99453 GGA3-202ENST00000538886 3766 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PHOX2BQ99453 DTNA-209ENST00000556414 1626 ntTSL 2 BASIC8.59□□□□□ -1.03
PHOX2BQ99453 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC8.59□□□□□ -1.03
PHOX2BQ99453 MED1-202ENST00000394287 2870 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PHOX2BQ99453 MAPK10-232ENST00000515400 2076 ntTSL 5 BASIC8.59□□□□□ -1.03
PHOX2BQ99453 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
PHOX2BQ99453 RAB36-201ENST00000263116 3828 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PHOX2BQ99453 Y_RNA.326-201ENST00000365176 113 ntBASIC8.59□□□□□ -1.03
PHOX2BQ99453 MIR138-2-201ENST00000384916 84 ntBASIC8.59□□□□□ -1.03
PHOX2BQ99453 AC025750.1-201ENST00000399891 379 ntBASIC8.59□□□□□ -1.03
PHOX2BQ99453 AC099535.1-201ENST00000408928 371 ntBASIC8.59□□□□□ -1.03
PHOX2BQ99453 RNU4-55P-201ENST00000410731 137 ntBASIC8.59□□□□□ -1.03
PHOX2BQ99453 AC109780.2-201ENST00000413467 845 ntBASIC8.59□□□□□ -1.03
PHOX2BQ99453 AL160153.1-201ENST00000415285 429 ntTSL 3 BASIC8.59□□□□□ -1.03
PHOX2BQ99453 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC8.59□□□□□ -1.03
PHOX2BQ99453 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC8.59□□□□□ -1.03
PHOX2BQ99453 CHCHD3P1-201ENST00000425516 676 ntBASIC8.59□□□□□ -1.03
PHOX2BQ99453 FGF12-202ENST00000430714 603 ntTSL 2 BASIC8.59□□□□□ -1.03
PHOX2BQ99453 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.03
PHOX2BQ99453 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC8.59□□□□□ -1.03
PHOX2BQ99453 AC015983.1-201ENST00000441577 373 ntBASIC8.59□□□□□ -1.03
PHOX2BQ99453 OR13K1P-201ENST00000444577 975 ntBASIC8.59□□□□□ -1.03
PHOX2BQ99453 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PHOX2BQ99453 USP9YP12-201ENST00000450481 570 ntBASIC8.59□□□□□ -1.03
PHOX2BQ99453 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PHOX2BQ99453 AC004947.1-202ENST00000457000 576 ntTSL 4 BASIC8.59□□□□□ -1.03
PHOX2BQ99453 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC8.59□□□□□ -1.03
PHOX2BQ99453 RPL7AP30-201ENST00000482859 796 ntBASIC8.59□□□□□ -1.03
PHOX2BQ99453 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC8.59□□□□□ -1.03
PHOX2BQ99453 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC8.59□□□□□ -1.03
PHOX2BQ99453 GNGT2-205ENST00000511673 500 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PHOX2BQ99453 EIF3KP1-201ENST00000513279 656 ntBASIC8.59□□□□□ -1.03
PHOX2BQ99453 MTCYBP43-201ENST00000513621 740 ntBASIC8.59□□□□□ -1.03
PHOX2BQ99453 RNU6-1045P-201ENST00000516321 107 ntBASIC8.59□□□□□ -1.03
PHOX2BQ99453 SNORA18.6-201ENST00000516792 115 ntBASIC8.59□□□□□ -1.03
PHOX2BQ99453 IGKV1D-32-201ENST00000517449 318 ntBASIC8.59□□□□□ -1.03
PHOX2BQ99453 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC8.59□□□□□ -1.03
PHOX2BQ99453 AK6P1-201ENST00000540219 478 ntBASIC8.59□□□□□ -1.03
PHOX2BQ99453 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC8.59□□□□□ -1.03
PHOX2BQ99453 RPS3AP23-202ENST00000574601 686 ntBASIC8.59□□□□□ -1.03
PHOX2BQ99453 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC8.59□□□□□ -1.03
PHOX2BQ99453 MIR4637-201ENST00000582405 84 ntBASIC8.59□□□□□ -1.03
PHOX2BQ99453 FXYD1-205ENST00000588607 619 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.03
PHOX2BQ99453 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC8.59□□□□□ -1.03
PHOX2BQ99453 AC073091.2-201ENST00000603205 907 ntBASIC8.59□□□□□ -1.03
PHOX2BQ99453 C1orf186-208ENST00000603378 614 ntTSL 3 BASIC8.59□□□□□ -1.03
PHOX2BQ99453 MARK3P1-201ENST00000604796 643 ntBASIC8.59□□□□□ -1.03
PHOX2BQ99453 AC010200.2-201ENST00000605098 235 ntBASIC8.59□□□□□ -1.03
PHOX2BQ99453 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC8.59□□□□□ -1.03
PHOX2BQ99453 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PHOX2BQ99453 AC002550.2-201ENST00000621246 394 ntBASIC8.59□□□□□ -1.03
PHOX2BQ99453 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC8.59□□□□□ -1.03
PHOX2BQ99453 AC016582.1-201ENST00000592640 1716 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PHOX2BQ99453 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC8.59□□□□□ -1.03
PHOX2BQ99453 AKAP2-201ENST00000259318 3101 ntAPPRIS ALT2 TSL 2 BASIC8.59□□□□□ -1.03
PHOX2BQ99453 AC013470.2-202ENST00000635746 1895 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
PHOX2BQ99453 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC8.59□□□□□ -1.03
PHOX2BQ99453 AC022507.1-201ENST00000548349 1505 ntBASIC8.59□□□□□ -1.03
PHOX2BQ99453 TMEM87A-203ENST00000448392 3049 ntTSL 1 (best) BASIC8.59□□□□□ -1.04
PHOX2BQ99453 PPP2R2A-202ENST00000380737 3940 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.04
PHOX2BQ99453 ADAMTS12-201ENST00000352040 4622 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PHOX2BQ99453 ANO2-201ENST00000327087 3720 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
PHOX2BQ99453 FAH-204ENST00000539156 3427 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PHOX2BQ99453 AL359924.1-201ENST00000450451 3127 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PHOX2BQ99453 AC044810.2-202ENST00000527847 2503 ntTSL 2 BASIC8.58□□□□□ -1.04
PHOX2BQ99453 AURKA-201ENST00000312783 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PHOX2BQ99453 RHBDD1-202ENST00000392062 5151 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
PHOX2BQ99453 AL158071.4-201ENST00000608358 4125 ntBASIC8.58□□□□□ -1.04
PHOX2BQ99453 SUPT20H-205ENST00000464744 2625 ntAPPRIS P3 TSL 2 BASIC8.58□□□□□ -1.04
PHOX2BQ99453 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PHOX2BQ99453 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PHOX2BQ99453 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PHOX2BQ99453 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PHOX2BQ99453 ZNF562-208ENST00000590155 1712 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
PHOX2BQ99453 SLC9A6-209ENST00000636347 4867 ntTSL 5 BASIC8.58□□□□□ -1.04
PHOX2BQ99453 GRHL1-201ENST00000324907 3563 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PHOX2BQ99453 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC8.58□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms