Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 RNA5SP53-201ENST00000391299 120 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SNX18Q96RF0 AL050305.1-201ENST00000399993 1230 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 AL035405.1-201ENST00000400795 710 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 AL356057.1-202ENST00000402263 756 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 NRIR-202ENST00000414795 506 ntTSL 3 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 MTND4LP21-201ENST00000415303 295 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 AC091492.1-201ENST00000419844 272 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 AL356133.1-201ENST00000444762 372 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 AL133480.2-201ENST00000456723 487 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 RNU7-157P-201ENST00000459600 66 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SNX18Q96RF0 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 AC114940.1-201ENST00000512162 1265 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 DCAF13P2-201ENST00000514188 555 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 AC034244.2-201ENST00000514668 858 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 AC113192.3-201ENST00000529152 742 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 PHBP2-201ENST00000532859 806 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 LDHC-204ENST00000536880 957 ntTSL 5 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 AC079148.1-201ENST00000565944 819 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SNX18Q96RF0 AL158050.2-201ENST00000605336 568 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 AC004908.3-201ENST00000610248 625 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 AL031777.2-201ENST00000611953 196 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 AC127071.2-201ENST00000623293 527 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 AC010608.3-201ENST00000625048 527 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 OR4G3P-201ENST00000633500 913 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SNX18Q96RF0 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SNX18Q96RF0 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SNX18Q96RF0 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SNX18Q96RF0 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 CASC19-255ENST00000641733 1385 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 AL136531.3-201ENST00000624378 3658 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 MSL3P1-202ENST00000440028 1468 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SNX18Q96RF0 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SNX18Q96RF0 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SNX18Q96RF0 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SNX18Q96RF0 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
SNX18Q96RF0 AC025809.2-201ENST00000625085 1802 ntBASIC6.13□□□□□ -1.43
SNX18Q96RF0 AL731556.1-201ENST00000394628 3711 ntBASIC6.13□□□□□ -1.43
SNX18Q96RF0 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
SNX18Q96RF0 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SNX18Q96RF0 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.13□□□□□ -1.43
SNX18Q96RF0 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SNX18Q96RF0 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.13□□□□□ -1.43
SNX18Q96RF0 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SNX18Q96RF0 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SNX18Q96RF0 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SNX18Q96RF0 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SNX18Q96RF0 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SNX18Q96RF0 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SNX18Q96RF0 RNA5SP114-201ENST00000363780 113 ntBASIC6.13□□□□□ -1.43
SNX18Q96RF0 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SNX18Q96RF0 RNU11-201ENST00000387069 134 ntBASIC6.13□□□□□ -1.43
SNX18Q96RF0 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SNX18Q96RF0 AL353692.2-201ENST00000407054 335 ntBASIC6.13□□□□□ -1.43
SNX18Q96RF0 STAT4-203ENST00000409995 709 ntTSL 5 BASIC6.13□□□□□ -1.43
SNX18Q96RF0 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC6.13□□□□□ -1.43
SNX18Q96RF0 OR5W1P-201ENST00000423705 938 ntBASIC6.13□□□□□ -1.43
SNX18Q96RF0 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SNX18Q96RF0 AC134879.1-201ENST00000426062 394 ntBASIC6.13□□□□□ -1.43
SNX18Q96RF0 AK3P5-201ENST00000432033 519 ntBASIC6.13□□□□□ -1.43
SNX18Q96RF0 FTLP17-201ENST00000432567 525 ntBASIC6.13□□□□□ -1.43
SNX18Q96RF0 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC6.13□□□□□ -1.43
SNX18Q96RF0 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.13□□□□□ -1.43
SNX18Q96RF0 AC011242.1-201ENST00000433596 1158 ntBASIC6.13□□□□□ -1.43
SNX18Q96RF0 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC6.13□□□□□ -1.43
SNX18Q96RF0 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.13□□□□□ -1.43
SNX18Q96RF0 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms