Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 AC091193.1-201ENST00000604640 448 ntBASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 uc_338.31-201ENST00000615595 186 ntBASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 AL137067.2-201ENST00000621202 131 ntBASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 AC107398.3-201ENST00000562284 7000 ntBASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 AC104966.1-201ENST00000467010 1464 ntBASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 RNA5SP110-201ENST00000362638 115 ntBASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 MIR433-201ENST00000384837 93 ntBASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 AL354707.3-201ENST00000427308 331 ntBASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 RPL23AP19-201ENST00000436229 369 ntBASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 AMYP1-201ENST00000440059 1023 ntBASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 GAPDHP23-201ENST00000444823 993 ntBASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 VPS25P1-201ENST00000455691 508 ntBASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 RN7SL629P-201ENST00000489622 285 ntBASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 AC020916.2-201ENST00000591242 360 ntBASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 AC091167.5-201ENST00000605689 894 ntBASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 AC022726.2-201ENST00000634673 547 ntBASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 AC009135.2-201ENST00000624136 1768 ntBASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 SNORA43.1-201ENST00000364863 140 ntBASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 AC092865.3-201ENST00000425390 1026 ntBASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 AL355355.1-201ENST00000442900 793 ntBASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 AC002553.3-201ENST00000453002 341 ntBASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 AC009963.3-201ENST00000458090 486 ntBASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 AC074386.1-201ENST00000476560 767 ntBASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 OR4A40P-201ENST00000533878 948 ntBASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 AP001858.2-201ENST00000536213 601 ntBASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 AC011445.2-201ENST00000599274 173 ntBASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 AC107980.1-201ENST00000558671 3355 ntBASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHROOM3Q8TF72 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 AC105235.1-201ENST00000623208 1816 ntBASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 AP003170.5-201ENST00000397185 335 ntBASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 AC026898.1-201ENST00000586404 571 ntBASIC6.43□□□□□ -1.38
SHROOM3Q8TF72 AL589863.1-201ENST00000595383 631 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms