Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 PGBD4P8-201ENST00000412993 562 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 Z75741.2-201ENST00000417272 1167 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 SNX18P3-201ENST00000424993 835 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 DEFB130D-201ENST00000426866 237 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 BX119904.1-201ENST00000432026 348 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 SNX18P9-201ENST00000440580 835 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 SS18L2P1-201ENST00000445923 213 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 HIST1H2APS6-201ENST00000448609 364 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 GLRXP3-201ENST00000470810 321 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 AC015820.1-201ENST00000473882 321 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 AC009153.1-201ENST00000485799 496 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 AC079203.1-201ENST00000487972 404 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 AC006070.1-201ENST00000508151 193 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 ENPP7P3-201ENST00000509123 241 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 AC098799.2-201ENST00000509466 868 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 OR5H4P-201ENST00000510851 923 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 HMGB1P47-201ENST00000511281 589 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 AC026700.1-201ENST00000512074 544 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 OR4V1P-201ENST00000525394 1140 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 AP001646.1-201ENST00000527936 915 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 AC104383.1-201ENST00000530297 370 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 GNG2-215ENST00000557376 573 ntTSL 4 BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 AC084757.1-201ENST00000559987 490 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 EIF4EBP2P2-201ENST00000563883 333 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 AC090616.5-202ENST00000582111 297 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 AL031281.1-201ENST00000604049 488 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 AC091946.2-201ENST00000606105 291 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 AC064836.2-201ENST00000609491 462 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 AL121757.2-201ENST00000611223 313 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 AC100793.4-201ENST00000613683 429 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 AC006449.1-201ENST00000616263 571 ntTSL 4 BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 GAS2-210ENST00000630668 674 ntTSL 5 BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 AC233280.20-201ENST00000637412 416 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 LINC01808-202ENST00000641680 1116 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 AC009948.3-201ENST00000603415 1798 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 EIF3EP1-201ENST00000433978 1316 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 HNRNPA1P54-201ENST00000411857 9714 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 OR4G2P-201ENST00000328113 903 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 PPIAP22-201ENST00000358455 498 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 Y_RNA.62-201ENST00000362840 99 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 RNU6-116P-201ENST00000384042 109 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 Y_RNA.560-201ENST00000384689 102 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 OR51A5P-201ENST00000415429 942 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 TNPO1P1-201ENST00000423641 1138 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 KRTAP3-4P-201ENST00000430780 280 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 TXNP2-201ENST00000443918 295 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 LIN28AP2-201ENST00000445283 458 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 AC003071.1-201ENST00000451219 789 ntBASIC6.78□□□□□ -1.32
ATG4DQ86TL0 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC6.78□□□□□ -1.32
ATG4DQ86TL0 AC008280.2-201ENST00000455473 307 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms